Z. japonica Nagirizaki
Zjn_sc00008.1.g03140.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT4G20070.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
295 |
7 |
291 |
2e-97 |
178 |
60.3 |
70.8 |
| Subject |
525 |
244 |
525 |
|
| Annot |
| Symbols: ATAAH, AAH | allantoate amidohydrolase | chr4:10861548-10864529 FORWARD LENGTH=525 |
| NR |
ref|XP_002438812.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
295 |
4 |
295 |
e-146 |
171.5 |
85.1 |
91.2 |
| Subject |
506 |
202 |
492 |
|
| Annot |
hypothetical protein SORBIDRAFT_10g026590 [Sorghum bicolor] gi|241917035|gb|EER90179.1| hypothetical protein SORBIDRAFT_10g026590 [Sorghum bicolor] |
| IRGSP |
Os06t0665500-01_chr06_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
295 |
4 |
290 |
e-144 |
166.4 |
81.7 |
89.5 |
| Subject |
491 |
194 |
479 |
|
| Annot |
|
| Sbicolor |
Sobic.010G220500.1.p|Chr10|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
295 |
4 |
295 |
e-149 |
171.5 |
85.1 |
91.2 |
| Subject |
506 |
202 |
492 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00008.1.g03140.1.sm.mkhc |
length: 295 aa. |
| IPR002933 |
Peptidase M20 |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0008152 |
metabolic process |
|
|
| Molecular Function |
GO:0016787 |
hydrolase activity |
|
|
| HMMPfam |
PF01546 |
Peptidase_M20 |
9.5e-10 |
39-284 |
| IPR011650 |
Peptidase M20, dimerisation domain |
| Gene3D |
G3DSA:3.30.70.360 |
no description |
1.2e-33 |
79-195 |
| HMMPfam |
PF07687 |
M20_dimer |
5.1e-06 |
66-175 |
| superfamily |
SSF55031 |
Bacterial |
8.1e-25 |
66-200 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.630.10 |
no description |
7.7e-43 |
232-289 |
| HMMPanther |
PTHR32494 |
FAMILY |
4.6e-95 |
6-294 |
| Seg |
seg |
seg |
NA |
225-232 |
| superfamily |
SSF53187 |
Zn-dependent |
2.1e-21 |
30-290 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 19 | 18146716 | 18150828 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00008.1 |
maker |
exon |
1334486 |
1334667 |
. |
+ |
. |
ID=Zjn_sc00008.1.g03140.1.sm.mkhc:exon:1 |
| Zjn_sc00008.1 |
maker |
exon |
1334746 |
1334843 |
. |
+ |
. |
ID=Zjn_sc00008.1.g03140.1.sm.mkhc:exon:2 |
| Zjn_sc00008.1 |
maker |
exon |
1335458 |
1335561 |
. |
+ |
. |
ID=Zjn_sc00008.1.g03140.1.sm.mkhc:exon:3 |
| Zjn_sc00008.1 |
maker |
exon |
1335650 |
1335734 |
. |
+ |
. |
ID=Zjn_sc00008.1.g03140.1.sm.mkhc:exon:4 |
| Zjn_sc00008.1 |
maker |
exon |
1335839 |
1335955 |
. |
+ |
. |
ID=Zjn_sc00008.1.g03140.1.sm.mkhc:exon:5 |
| Zjn_sc00008.1 |
maker |
exon |
1336670 |
1336968 |
. |
+ |
. |
ID=Zjn_sc00008.1.g03140.1.sm.mkhc:exon:6 |
| Zjn_sc00008.1 |
maker |
exon |
1337066 |
1337152 |
. |
+ |
. |
ID=Zjn_sc00008.1.g03140.1.sm.mkhc:exon:7 |
| Zjn_sc00008.1 |
maker |
exon |
1337731 |
1337970 |
. |
+ |
. |
ID=Zjn_sc00008.1.g03140.1.sm.mkhc:exon:8 |
| Zjn_sc00008.1 |
maker |
exon |
1338066 |
1338191 |
. |
+ |
. |
ID=Zjn_sc00008.1.g03140.1.sm.mkhc:exon:9 |
| Zjn_sc00008.1 |
maker |
exon |
1338290 |
1338598 |
. |
+ |
. |
ID=Zjn_sc00008.1.g03140.1.sm.mkhc:exon:10 |