Z. japonica Nagirizaki
Zjn_sc00008.1.g02570.1.am.mkhc
Sequence
-
BLAST
| TAIR10 |
AT4G20930.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
177 |
34 |
126 |
2e-22 |
196 |
32.8 |
42.4 |
| Subject |
347 |
40 |
181 |
|
| Annot |
| Symbols: | 6-phosphogluconate dehydrogenase family protein | chr4:11198627-11201036 REVERSE LENGTH=347 |
| NR |
gb|AFW68999.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
177 |
1 |
128 |
2e-43 |
160.5 |
57.1 |
62.7 |
| Subject |
284 |
1 |
178 |
|
| Annot |
hypothetical protein ZEAMMB73_927705 [Zea mays] |
| IRGSP |
Os06t0677400-01_chr06_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
177 |
1 |
126 |
2e-42 |
193.2 |
52 |
61 |
| Subject |
342 |
1 |
176 |
|
| Annot |
|
| Sbicolor |
No_hits |
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00008.1.g02570.1.am.mkhc |
length: 177 aa. |
| IPR002204 |
3-hydroxyisobutyrate dehydrogenase-related, conserved site |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006573 |
valine metabolic process |
|
|
| Molecular Function |
GO:0008442 |
3-hydroxyisobutyrate dehydrogenase activity |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| PatternScan |
PS00895 |
3_HYDROXYISOBUT_DH |
NA |
36-49 |
| IPR006115 |
6-phosphogluconate dehydrogenase, NADP-binding |
| Molecular Function |
GO:0004616 |
phosphogluconate dehydrogenase (decarboxylating) activity |
|
|
| Biological Process |
GO:0006098 |
pentose-phosphate shunt |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| HMMPfam |
PF03446 |
NAD_binding_2 |
6.3e-19 |
32-103 |
| IPR008927 |
6-phosphogluconate dehydrogenase, C-terminal-like |
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| superfamily |
SSF48179 |
6-phosphogluconate |
9.1e-06 |
123-170 |
| IPR013328 |
Dehydrogenase, multihelical |
| Molecular Function |
GO:0016491 |
oxidoreductase activity |
|
|
| Molecular Function |
GO:0016616 |
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
|
|
| Molecular Function |
GO:0050662 |
coenzyme binding |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| Gene3D |
G3DSA:1.10.1040.10 |
no description |
1.1e-08 |
102-170 |
| IPR015815 |
Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type |
| Molecular Function |
GO:0016491 |
oxidoreductase activity |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| HMMPanther |
PTHR22981 |
3-HYDROXYISOBUTYRATE |
5.6e-27 |
32-101 |
| IPR016040 |
NAD(P)-binding domain |
| Gene3D |
G3DSA:3.40.50.720 |
no description |
4.8e-24 |
33-101 |
| no_ID |
|
| HMMPanther |
PTHR22981:SF7 |
3-HYDROXYISOBUTYRATE |
5.6e-27 |
32-101 |
| superfamily |
SSF51735 |
NAD(P)-binding |
3.2e-19 |
32-123 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 19 | 18397680 | 18401022 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00008.1 |
maker |
exon |
1084292 |
1085339 |
. |
- |
. |
ID=Zjn_sc00008.1.g02570.1.am.mkhc:exon:7 |
| Zjn_sc00008.1 |
maker |
exon |
1085420 |
1085499 |
. |
- |
. |
ID=Zjn_sc00008.1.g02570.1.am.mkhc:exon:6 |
| Zjn_sc00008.1 |
maker |
exon |
1086264 |
1086325 |
. |
- |
. |
ID=Zjn_sc00008.1.g02570.1.am.mkhc:exon:5 |
| Zjn_sc00008.1 |
maker |
exon |
1086764 |
1086882 |
. |
- |
. |
ID=Zjn_sc00008.1.g02570.1.am.mkhc:exon:4 |
| Zjn_sc00008.1 |
maker |
exon |
1087028 |
1087116 |
. |
- |
. |
ID=Zjn_sc00008.1.g02570.1.am.mkhc:exon:3 |
| Zjn_sc00008.1 |
maker |
exon |
1087313 |
1087457 |
. |
- |
. |
ID=Zjn_sc00008.1.g02570.1.am.mkhc:exon:2 |
| Zjn_sc00008.1 |
maker |
exon |
1087547 |
1087634 |
. |
- |
. |
ID=Zjn_sc00008.1.g02570.1.am.mkhc:exon:1 |