| TAIR10 | AT5G37020.1 | Length | Start | End | E-value | Length(%) | Iden(%) | Posi(%) | |
|---|---|---|---|---|---|---|---|---|---|
| Query | 715 | 25 | 673 | e-127 | 113.4 | 43.4 | 53 | ||
| Subject | 811 | 214 | 794 | ||||||
| Annot | | Symbols: ARF8, ATARF8 | auxin response factor 8 | chr5:14630151-14634106 FORWARD LENGTH=811 | ||||||||
| NR | ref|XP_008644237.1| | Length | Start | End | E-value | Length(%) | Iden(%) | Posi(%) | |
| Query | 715 | 26 | 715 | 0.0 | 127.7 | 82 | 86.3 | ||
| Subject | 913 | 223 | 912 | ||||||
| Annot | PREDICTED: uncharacterized protein LOC100502480 isoform X1 [Zea mays] gi|670405146|ref|XP_008644238.1| PREDICTED: uncharacterized protein LOC100502480 isoform X1 [Zea mays] | ||||||||
| IRGSP | Os06t0677800-01_chr06_irgsp1_locus | Length | Start | End | E-value | Length(%) | Iden(%) | Posi(%) | |
| Query | 715 | 26 | 715 | 0.0 | 128.3 | 81.8 | 86.9 | ||
| Subject | 917 | 223 | 917 | ||||||
| Annot | |||||||||
| Sbicolor | Sobic.010G229000.1.p|Chr10|gene | Length | Start | End | E-value | Length(%) | Iden(%) | Posi(%) | |
| Query | 715 | 26 | 715 | 0.0 | 128.5 | 82.5 | 87.1 | ||
| Subject | 919 | 224 | 919 | ||||||
| Annot | |||||||||
| Zjn_sc00008.1.g02530.1.sm.mkhc | length: 715 aa. | |||
| IPR003311 | AUX/IAA protein | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Cellular Component | GO:0005634 | nucleus | ||
| Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
| HMMPfam | PF02309 | AUX_IAA | 7.5e-22 | 578-673 |
| IPR010525 | Auxin response factor | |||
| Molecular Function | GO:0003677 | DNA binding | ||
| Cellular Component | GO:0005634 | nucleus | ||
| Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
| Biological Process | GO:0009725 | response to hormone stimulus | ||
| HMMPfam | PF06507 | Auxin_resp | 5.6e-36 | 63-146 |
| IPR011525 | Aux/IAA-ARF-dimerisation | |||
| Molecular Function | GO:0046983 | protein dimerization activity | ||
| ProfileScan | PS50962 | IAA_ARF | 25.172 | 585-667 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 318-339 |
| HMMPanther | PTHR31384 | FAMILY | 1.8e-120 | 26-711 |
| Seg | seg | seg | NA | 61-67 279-302 333-363 608-625 |
| superfamily | SSF54277 | CAD | 2.2e-08 | 572-665 |
| Chromosome | Start | End | Strand |
|---|---|---|---|
| 19 | 18422115 | 18427966 | - |
| scaffold | source | type | start | end | score | strand | phase | attributes |
|---|---|---|---|---|---|---|---|---|
| Zjn_sc00008.1 | maker | exon | 1057348 | 1057760 | . | + | . | ID=Zjn_sc00008.1.g02530.1.sm.mkhc:exon:1 |
| Zjn_sc00008.1 | maker | exon | 1058486 | 1058501 | . | + | . | ID=Zjn_sc00008.1.g02530.1.sm.mkhc:exon:2 |
| Zjn_sc00008.1 | maker | exon | 1059881 | 1060045 | . | + | . | ID=Zjn_sc00008.1.g02530.1.sm.mkhc:exon:3 |
| Zjn_sc00008.1 | maker | exon | 1060111 | 1060233 | . | + | . | ID=Zjn_sc00008.1.g02530.1.sm.mkhc:exon:4 |
| Zjn_sc00008.1 | maker | exon | 1060528 | 1060603 | . | + | . | ID=Zjn_sc00008.1.g02530.1.sm.mkhc:exon:5 |
| Zjn_sc00008.1 | maker | exon | 1060785 | 1060932 | . | + | . | ID=Zjn_sc00008.1.g02530.1.sm.mkhc:exon:6 |
| Zjn_sc00008.1 | maker | exon | 1061029 | 1062206 | . | + | . | ID=Zjn_sc00008.1.g02530.1.sm.mkhc:exon:7 |
| Zjn_sc00008.1 | maker | exon | 1062465 | 1062655 | . | + | . | ID=Zjn_sc00008.1.g02530.1.sm.mkhc:exon:8 |
| Zjn_sc00008.1 | maker | exon | 1062750 | 1063199 | . | + | . | ID=Zjn_sc00008.1.g02530.1.sm.mkhc:exon:9 |