Z. japonica Nagirizaki
Zjn_sc00008.1.g02000.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G67230.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 528 1 527 e-151 93.2 51.1 66.7
Subject 492 1 479
Annot | Symbols: IRX14-L, I14H | Nucleotide-diphospho-sugar transferases superfamily protein | chr5:26822506-26824181 FORWARD LENGTH=492
NR emb|CAI93190.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 528 1 526 0.0 100.6 85 91.1
Subject 531 1 527
Annot glycosyltransferase [Saccharum officinarum]
IRGSP Os06t0687900-01_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 528 405 500 2e-46 22.7 15.9 17.6
Subject 120 1 96
Annot
Sbicolor Sobic.010G238800.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 528 1 526 0.0 99.8 85.2 90.5
Subject 527 1 523
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00008.1.g02000.1.sm.mkhc length: 528 aa.
IPR005027 Glycosyl transferase, family 43
method AccNumber shortName E-value location
Molecular Function GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity    
Cellular Component GO:0016020 membrane    
HMMPanther PTHR10896 GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 1.4e-116 25-478
HMMPfam PF03360 Glyco_transf_43 1.4e-50 217-455
no_ID  
Gene3D G3DSA:3.90.550.10 no description 1.5e-66 196-470
HMMPanther PTHR10896:SF1 BETA-1,3-GLUCURONYLTRANSFERASE 1.4e-116 25-478
Seg seg seg NA 9-42
58-130
superfamily SSF53448 Nucleotide-diphospho-sugar 1.5e-74 195-474
Pseudomolecule
Chromosome Start End Strand
191865152118655007+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00008.1 maker exon 830307 830718 . - . ID=Zjn_sc00008.1.g02000.1.sm.mkhc:exon:3
Zjn_sc00008.1 maker exon 832275 832823 . - . ID=Zjn_sc00008.1.g02000.1.sm.mkhc:exon:2
Zjn_sc00008.1 maker exon 832949 833793 . - . ID=Zjn_sc00008.1.g02000.1.sm.mkhc:exon:1

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