Z. japonica Nagirizaki
Zjn_sc00008.1.g01370.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G52560.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 544 24 537 0.0 112.9 70.4 81.4
Subject 614 45 561
Annot | Symbols: ATUSP, USP | UDP-sugar pyrophosphorylase | chr5:21331230-21334573 FORWARD LENGTH=614
NR ref|XP_004966109.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 544 17 544 0.0 115.3 86.8 91.4
Subject 627 17 584
Annot PREDICTED: UDP-sugar pyrophosphorylase isoform X1 [Setaria italica]
IRGSP Os06t0701200-01_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 544 1 544 0.0 113.2 87.3 92.5
Subject 616 1 583
Annot
Sbicolor Sobic.010G251200.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 544 15 544 0.0 114.7 86.4 91
Subject 624 11 581
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00008.1.g01370.1.sm.mkhc length: 544 aa.
IPR002618 UTP--glucose-1-phosphate uridylyltransferase
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016779 nucleotidyltransferase activity    
HMMPanther PTHR11952 UDP- 5.7e-223 47-537
HMMPfam PF01704 UDPGP 7.2e-13 105-318
no_ID  
Gene3D G3DSA:3.90.550.10 no description 7.5e-101 45-457
HMMPanther PTHR11952:SF2 UDP-N-ACTEYLGLUCOSAMINE 5.7e-223 47-537
Seg seg seg NA 1-22
30-41
superfamily SSF53448 Nucleotide-diphospho-sugar 3.6e-105 42-536
Pseudomolecule
Chromosome Start End Strand
191889953218907453-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00008.1 maker exon 577861 577989 . + . ID=Zjn_sc00008.1.g01370.1.sm.mkhc:exon:1
Zjn_sc00008.1 maker exon 579733 579849 . + . ID=Zjn_sc00008.1.g01370.1.sm.mkhc:exon:2
Zjn_sc00008.1 maker exon 580493 580618 . + . ID=Zjn_sc00008.1.g01370.1.sm.mkhc:exon:3
Zjn_sc00008.1 maker exon 581159 581258 . + . ID=Zjn_sc00008.1.g01370.1.sm.mkhc:exon:4
Zjn_sc00008.1 maker exon 581667 581794 . + . ID=Zjn_sc00008.1.g01370.1.sm.mkhc:exon:5
Zjn_sc00008.1 maker exon 581947 582018 . + . ID=Zjn_sc00008.1.g01370.1.sm.mkhc:exon:6
Zjn_sc00008.1 maker exon 582147 582211 . + . ID=Zjn_sc00008.1.g01370.1.sm.mkhc:exon:7
Zjn_sc00008.1 maker exon 582315 582375 . + . ID=Zjn_sc00008.1.g01370.1.sm.mkhc:exon:8
Zjn_sc00008.1 maker exon 582498 582615 . + . ID=Zjn_sc00008.1.g01370.1.sm.mkhc:exon:9
Zjn_sc00008.1 maker exon 582919 583043 . + . ID=Zjn_sc00008.1.g01370.1.sm.mkhc:exon:10
Zjn_sc00008.1 maker exon 583298 583374 . + . ID=Zjn_sc00008.1.g01370.1.sm.mkhc:exon:11
Zjn_sc00008.1 maker exon 583453 583558 . + . ID=Zjn_sc00008.1.g01370.1.sm.mkhc:exon:12
Zjn_sc00008.1 maker exon 584163 584222 . + . ID=Zjn_sc00008.1.g01370.1.sm.mkhc:exon:13
Zjn_sc00008.1 maker exon 584701 584781 . + . ID=Zjn_sc00008.1.g01370.1.sm.mkhc:exon:14
Zjn_sc00008.1 maker exon 584883 585782 . + . ID=Zjn_sc00008.1.g01370.1.sm.mkhc:exon:15

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