Z. japonica Nagirizaki
Zjn_sc00007.1.g11890.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G37040.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 713 23 713 0.0 101.7 73.9 83.9
Subject 725 34 725
Annot | Symbols: PAL1, ATPAL1 | PHE ammonia lyase 1 | chr2:15557602-15560237 REVERSE LENGTH=725
NR ref|XP_004953156.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 713 1 713 0.0 100 94.8 97.6
Subject 713 1 713
Annot PREDICTED: phenylalanine ammonia-lyase [Setaria italica]
IRGSP Os02t0627100-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 713 1 713 0.0 100 92.4 96.1
Subject 713 1 713
Annot
Sbicolor Sobic.004G220600.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 713 9 713 0.0 100.6 94.4 97.2
Subject 717 13 717
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00007.1.g11890.1.sm.mk length: 713 aa.
IPR001106 Aromatic amino acid lyase
method AccNumber shortName E-value location
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0016841 ammonia-lyase activity    
HMMPfam PF00221 Lyase_aromatic 2.7e-174 54-547
54-547
IPR005922 Phenylalanine ammonia-lyase
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006559 L-phenylalanine catabolic process    
Molecular Function GO:0016841 ammonia-lyase activity    
HMMTigr TIGR01226 phe_am_lyase: 0 23-703
23-703
IPR008948 L-Aspartase-like
Molecular Function GO:0003824 catalytic activity    
superfamily SSF48557 L-aspartase-like 5.3e-266 22-713
22-713
IPR022313 Phenylalanine/histidine ammonia-lyases, active site
Molecular Function GO:0016841 ammonia-lyase activity    
PatternScan PS00488 PAL_HISTIDASE NA 195-211
195-211
IPR023144 Phenylalanine ammonia-lyase, shielding domain
Gene3D G3DSA:1.10.274.20 no description 9.7e-52 532-647
532-647
IPR024083 Fumarase/histidase, N-terminal
Gene3D G3DSA:1.10.275.10 no description 1.9e-91 22-258
22-258
no_ID  
Gene3D G3DSA:1.20.200.10 no description 4.9e-136 648-702
648-702
HMMPanther PTHR32364 FAMILY 0 6-713
6-713
HMMPanther PTHR32364:SF2 SUBFAMILY 0 6-713
6-713
Pseudomolecule
Chromosome Start End Strand
71505577015057911-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00007.1 maker_non_over exon 5198481 5200622 . + . ID=Zjn_sc00007.1.g11890.1.sm.mk:exon:1

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