Z. japonica Nagirizaki
Zjn_sc00007.1.g11760.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G37170.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 288 1 288 e-138 99 85.8 89.6
Subject 285 1 283
Annot | Symbols: PIP2B, PIP2;2 | plasma membrane intrinsic protein 2 | chr2:15613624-15614791 REVERSE LENGTH=285
NR ref|NP_001105026.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 288 1 288 e-155 100 94.4 97.6
Subject 288 1 288
Annot aquaporin PIP2-4 [Zea mays] gi|75308072|sp|Q9ATM6.1|PIP24_MAIZE RecName: Full=Aquaporin PIP2-4; AltName: Full=Plasma membrane intrinsic protein 2-4; AltName: Full=ZmPIP2-4; AltName: Full=ZmPIP2;4 gi|13447807|gb|AAK26761.1| plasma membrane integral protein ZmPIP2-4 [Zea mays] gi|223947997|gb|ACN28082.1| unknown [Zea mays] gi|413938223|gb|AFW72774.1| plasma membrane intrinsic protein2 [Zea mays]
IRGSP Os02t0629200-02_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 288 1 288 e-153 100 90.6 94.1
Subject 288 1 288
Annot
Sbicolor Sobic.004G222000.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 288 1 288 e-157 100.3 94.8 97.6
Subject 289 1 289
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00007.1.g11760.1.sm.mkhc length: 288 aa.
IPR000425 Major intrinsic protein
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00783 MINTRINSICP 3.8e-72 41-60
91-115
128-147
177-195
213-235
253-273
HMMPanther PTHR19139 AQUAPORIN 2.6e-199 10-279
HMMPfam PF00230 MIP 3.5e-86 33-269
HMMTigr TIGR00861 MIP: 7.2e-64 45-268
IPR022357 Major intrinsic protein, conserved site
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
PatternScan PS00221 MIP NA 109-117
IPR023271 Aquaporin-like
Gene3D G3DSA:1.20.1080.10 no description 4.7e-93 14-281
superfamily SSF81338 Aquaporin-like 1.3e-61 30-274
no_ID  
HMMPanther PTHR19139:SF27 AQUAPORIN-RELATED 2.6e-199 10-279
Pseudomolecule
Chromosome Start End Strand
71511801415121409+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00007.1 maker exon 5134983 5135353 . - . ID=Zjn_sc00007.1.g11760.1.sm.mkhc:exon:4
Zjn_sc00007.1 maker exon 5136083 5136223 . - . ID=Zjn_sc00007.1.g11760.1.sm.mkhc:exon:3
Zjn_sc00007.1 maker exon 5137603 5137898 . - . ID=Zjn_sc00007.1.g11760.1.sm.mkhc:exon:2
Zjn_sc00007.1 maker exon 5138016 5138378 . - . ID=Zjn_sc00007.1.g11760.1.sm.mkhc:exon:1

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