Z. japonica Nagirizaki
Zjn_sc00007.1.g09850.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G00430.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 289 1 289 e-148 99.3 87.2 94.1
Subject 287 1 287
Annot | Symbols: TMP-C, PIP1;4, PIP1E | plasma membrane intrinsic protein 1;4 | chr4:186143-187531 REVERSE LENGTH=287
NR ref|XP_002454508.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 289 1 289 e-161 100 97.6 99
Subject 289 1 289
Annot hypothetical protein SORBIDRAFT_04g032430 [Sorghum bicolor] gi|241934339|gb|EES07484.1| hypothetical protein SORBIDRAFT_04g032430 [Sorghum bicolor]
IRGSP Os02t0666200-02_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 289 1 289 e-163 100 95.8 99.3
Subject 289 1 289
Annot
Sbicolor Sobic.004G288700.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 289 1 289 e-164 100 97.6 99
Subject 289 1 289
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00007.1.g09850.1.sm.mkhc length: 289 aa.
IPR000425 Major intrinsic protein
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00783 MINTRINSICP 1.4e-70 55-74
97-121
134-153
183-201
219-241
259-279
HMMPanther PTHR19139 AQUAPORIN 1.1e-229 1-288
HMMPfam PF00230 MIP 1.1e-84 47-276
HMMTigr TIGR00861 MIP: 1.8e-64 59-275
IPR022357 Major intrinsic protein, conserved site
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
PatternScan PS00221 MIP NA 115-123
IPR023271 Aquaporin-like
Gene3D G3DSA:1.20.1080.10 no description 1.1e-87 28-281
superfamily SSF81338 Aquaporin-like 5.7e-60 44-280
no_ID  
HMMPanther PTHR19139:SF56 SUBFAMILY 1.1e-229 1-288
Seg seg seg NA 163-174
Pseudomolecule
Chromosome Start End Strand
71596305515965410+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00007.1 maker exon 4290982 4291334 . - . ID=Zjn_sc00007.1.g09850.1.sm.mkhc:exon:4
Zjn_sc00007.1 maker exon 4291587 4291727 . - . ID=Zjn_sc00007.1.g09850.1.sm.mkhc:exon:3
Zjn_sc00007.1 maker exon 4291853 4292148 . - . ID=Zjn_sc00007.1.g09850.1.sm.mkhc:exon:2
Zjn_sc00007.1 maker exon 4292517 4293337 . - . ID=Zjn_sc00007.1.g09850.1.sm.mkhc:exon:1

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