Z. japonica Nagirizaki
Zjn_sc00007.1.g08660.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G32740.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 343 1 343 1e-36 91 36.2 49.6
Subject 312 1 312
Annot | Symbols: | SBP (S-ribonuclease binding protein) family protein | chr1:11844883-11846082 FORWARD LENGTH=312
NR ref|XP_004953489.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 343 1 343 e-123 100.6 85.4 89.8
Subject 345 1 345
Annot PREDICTED: BOI-related E3 ubiquitin-protein ligase 1-like [Setaria italica]
IRGSP Os02t0687500-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 343 24 343 e-110 92.7 70 77
Subject 318 1 318
Annot
Sbicolor Sobic.004G278000.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 343 1 343 e-114 102.9 81.9 86.6
Subject 353 1 353
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00007.1.g08660.1.sm.mkhc length: 343 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
ProfileScan PS50089 ZF_RING_2 8.742 291-330
IPR017066 S-ribonuclease binding protein, SBP1, pollen
HMMPIR PIRSF036836 Ribonuclease-binding 2e-103 1-343
no_ID  
Coil coil coiled-coil NA 187-232
HMMPanther PTHR14493 UNCHARACTERIZED 5.9e-26 105-341
HMMPanther PTHR14493:SF21 PROTEIN 5.9e-26 105-341
Seg seg seg NA 117-129
194-261
Pseudomolecule
Chromosome Start End Strand
71642403916425950-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00007.1 maker exon 3830442 3831030 . + . ID=Zjn_sc00007.1.g08660.1.sm.mkhc:exon:1
Zjn_sc00007.1 maker exon 3831166 3831257 . + . ID=Zjn_sc00007.1.g08660.1.sm.mkhc:exon:2
Zjn_sc00007.1 maker exon 3831369 3831727 . + . ID=Zjn_sc00007.1.g08660.1.sm.mkhc:exon:3
Zjn_sc00007.1 maker exon 3831820 3832353 . + . ID=Zjn_sc00007.1.g08660.1.sm.mkhc:exon:4

Top