Z. japonica Nagirizaki
Zjn_sc00007.1.g08380.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT4G17830.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
437 |
2 |
435 |
0.0 |
100.7 |
70.5 |
84.7 |
| Subject |
440 |
4 |
439 |
|
| Annot |
| Symbols: | Peptidase M20/M25/M40 family protein | chr4:9915916-9918049 FORWARD LENGTH=440 |
| NR |
ref|XP_004953509.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
437 |
6 |
437 |
0.0 |
102.3 |
92 |
95.4 |
| Subject |
447 |
9 |
447 |
|
| Annot |
PREDICTED: acetylornithine deacetylase [Setaria italica] |
| IRGSP |
Os02t0690800-02_chr02_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
437 |
1 |
436 |
0.0 |
101.4 |
88.1 |
92.4 |
| Subject |
443 |
1 |
442 |
|
| Annot |
|
| Sbicolor |
Sobic.004G275600.1.p|Chr04|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
437 |
2 |
436 |
0.0 |
102.3 |
87.2 |
92.7 |
| Subject |
447 |
5 |
446 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00007.1.g08380.1.sm.mkhc |
length: 437 aa. |
| IPR002933 |
Peptidase M20 |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0008152 |
metabolic process |
|
|
| Molecular Function |
GO:0016787 |
hydrolase activity |
|
|
| HMMPfam |
PF01546 |
Peptidase_M20 |
2.5e-23 |
97-431 |
| IPR011650 |
Peptidase M20, dimerisation domain |
| Gene3D |
G3DSA:3.30.70.360 |
no description |
1.4e-10 |
212-316 |
| HMMPfam |
PF07687 |
M20_dimer |
1.5e-06 |
207-316 |
| superfamily |
SSF55031 |
Bacterial |
1.3e-09 |
211-315 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
302-323 |
| Gene3D |
G3DSA:3.40.630.10 |
no description |
3.3e-32 |
346-434 |
| HMMPanther |
PTHR11014 |
PEPTIDASE |
7.2e-259 |
13-435 |
| HMMPanther |
PTHR11014:SF7 |
ACETYLORNITHINE |
7.2e-259 |
13-435 |
| superfamily |
SSF53187 |
Zn-dependent |
4.2e-30 |
13-433 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 7 | 16538856 | 16542472 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00007.1 |
maker |
exon |
3713920 |
3714440 |
. |
- |
. |
ID=Zjn_sc00007.1.g08380.1.sm.mkhc:exon:9 |
| Zjn_sc00007.1 |
maker |
exon |
3714638 |
3714671 |
. |
- |
. |
ID=Zjn_sc00007.1.g08380.1.sm.mkhc:exon:8 |
| Zjn_sc00007.1 |
maker |
exon |
3714745 |
3714901 |
. |
- |
. |
ID=Zjn_sc00007.1.g08380.1.sm.mkhc:exon:7 |
| Zjn_sc00007.1 |
maker |
exon |
3714995 |
3715117 |
. |
- |
. |
ID=Zjn_sc00007.1.g08380.1.sm.mkhc:exon:6 |
| Zjn_sc00007.1 |
maker |
exon |
3715597 |
3715654 |
. |
- |
. |
ID=Zjn_sc00007.1.g08380.1.sm.mkhc:exon:5 |
| Zjn_sc00007.1 |
maker |
exon |
3715774 |
3715912 |
. |
- |
. |
ID=Zjn_sc00007.1.g08380.1.sm.mkhc:exon:4 |
| Zjn_sc00007.1 |
maker |
exon |
3716189 |
3716297 |
. |
- |
. |
ID=Zjn_sc00007.1.g08380.1.sm.mkhc:exon:3 |
| Zjn_sc00007.1 |
maker |
exon |
3716390 |
3716643 |
. |
- |
. |
ID=Zjn_sc00007.1.g08380.1.sm.mkhc:exon:2 |
| Zjn_sc00007.1 |
maker |
exon |
3717207 |
3717536 |
. |
- |
. |
ID=Zjn_sc00007.1.g08380.1.sm.mkhc:exon:1 |