Z. japonica Nagirizaki
Zjn_sc00007.1.g08260.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 No_hits
NR ref|XP_004953525.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 390 1 377 e-142 121.8 75.6 84.6
Subject 475 1 456
Annot PREDICTED: F-box/LRR-repeat protein At3g59190-like [Setaria italica]
IRGSP Os02t0694100-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 390 1 377 e-135 121.8 72.8 80.8
Subject 475 1 456
Annot
Sbicolor Sobic.004G274500.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 390 32 377 e-141 112.3 69 77.4
Subject 438 9 419
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00007.1.g08260.1.sm.mk length: 390 aa.
IPR001810 F-box domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 2.7e-06 33-65
33-65
HMMSmart SM00256 A 0.00064 37-76
37-76
superfamily SSF81383 F-box 3.9e-08 29-74
29-74
no_ID  
Gene3D G3DSA:3.80.10.10 no description 3.9e-19 32-246
32-246
Seg seg seg NA 16-32
52-85
98-115
134-151
156-176
16-32
52-85
98-115
134-151
156-176
superfamily SSF52047 RNI-like 1.6e-11 123-263
123-263
Pseudomolecule
Chromosome Start End Strand
71660117416604091-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00007.1 maker_non_over exon 3652301 3652542 . + . ID=Zjn_sc00007.1.g08260.1.sm.mk:exon:1
Zjn_sc00007.1 maker_non_over exon 3653039 3653696 . + . ID=Zjn_sc00007.1.g08260.1.sm.mk:exon:2
Zjn_sc00007.1 maker_non_over exon 3654012 3654237 . + . ID=Zjn_sc00007.1.g08260.1.sm.mk:exon:3
Zjn_sc00007.1 maker_non_over exon 3655172 3655218 . + . ID=Zjn_sc00007.1.g08260.1.sm.mk:exon:4

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