Z. japonica Nagirizaki
Zjn_sc00007.1.g07560.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G75330.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 371 18 346 e-134 101.1 63.3 75.2
Subject 375 28 373
Annot | Symbols: OTC | ornithine carbamoyltransferase | chr1:28266457-28268383 REVERSE LENGTH=375
NR ref|XP_004953604.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 371 9 346 e-168 100.5 80.3 84.4
Subject 373 15 371
Annot PREDICTED: ornithine carbamoyltransferase, chloroplastic [Setaria italica]
IRGSP Os02t0704800-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 371 61 346 e-154 98.9 70.1 73.9
Subject 367 59 365
Annot
Sbicolor Sobic.004G268100.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 371 2 346 e-162 100.5 81.4 85.2
Subject 373 5 371
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00007.1.g07560.1.sm.mkhc length: 371 aa.
IPR002292 Ornithine/putrescine carbamoyltransferase
method AccNumber shortName E-value location
Molecular Function GO:0016743 carboxyl- or carbamoyltransferase activity    
FPrintScan PR00102 OTCASE 4.4e-22 112-126
145-158
185-199
325-336
IPR006130 Aspartate/ornithine carbamoyltransferase
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0016597 amino acid binding    
Molecular Function GO:0016743 carboxyl- or carbamoyltransferase activity    
FPrintScan PR00100 AOTCASE 4.7e-23 114-133
196-207
299-308
311-334
Gene3D G3DSA:3.40.50.1370 no description 3.5e-15 67-205
206-289
290-333
superfamily SSF53671 Aspartate/ornithine 2.5e-98 62-346
IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0016597 amino acid binding    
Molecular Function GO:0016743 carboxyl- or carbamoyltransferase activity    
HMMPfam PF00185 OTCace 1.6e-18 216-289
289-344
IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0016743 carboxyl- or carbamoyltransferase activity    
HMMPfam PF02729 OTCace_N 3.5e-47 68-210
no_ID  
HMMPanther PTHR11405 CARBAMOYLTRANSFERASE 3e-172 14-341
HMMPanther PTHR11405:SF1 ORNITHINE 3e-172 14-341
Seg seg seg NA 13-24
34-59
Pseudomolecule
Chromosome Start End Strand
71691874316924624+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00007.1 maker exon 3331768 3331851 . - . ID=Zjn_sc00007.1.g07560.1.sm.mkhc:exon:6
Zjn_sc00007.1 maker exon 3334838 3335005 . - . ID=Zjn_sc00007.1.g07560.1.sm.mkhc:exon:5
Zjn_sc00007.1 maker exon 3335426 3335635 . - . ID=Zjn_sc00007.1.g07560.1.sm.mkhc:exon:4
Zjn_sc00007.1 maker exon 3335711 3335842 . - . ID=Zjn_sc00007.1.g07560.1.sm.mkhc:exon:3
Zjn_sc00007.1 maker exon 3336439 3336773 . - . ID=Zjn_sc00007.1.g07560.1.sm.mkhc:exon:2
Zjn_sc00007.1 maker exon 3337463 3337649 . - . ID=Zjn_sc00007.1.g07560.1.sm.mkhc:exon:1

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