Z. japonica Nagirizaki
Zjn_sc00007.1.g05620.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT5G37600.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
356 |
1 |
356 |
0.0 |
100 |
86.5 |
94.9 |
| Subject |
356 |
1 |
356 |
|
| Annot |
| Symbols: ATGSR1, GLN1;1, GSR 1, ATGLN1;1 | glutamine synthase clone R1 | chr5:14933574-14935656 REVERSE LENGTH=356 |
| NR |
ref|XP_004953842.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
356 |
1 |
356 |
0.0 |
100 |
97.2 |
99.4 |
| Subject |
356 |
1 |
356 |
|
| Annot |
PREDICTED: glutamine synthetase cytosolic isozyme 1-1 [Setaria italica] |
| IRGSP |
Os02t0735200-03_chr02_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
356 |
1 |
356 |
0.0 |
100 |
95.2 |
98.9 |
| Subject |
356 |
1 |
356 |
|
| Annot |
|
| Sbicolor |
Sobic.004G247000.1.p|Chr04|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
356 |
1 |
356 |
0.0 |
100 |
94.7 |
99.2 |
| Subject |
356 |
1 |
356 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00007.1.g05620.1.sm.mkhc |
length: 356 aa. |
| IPR008146 |
Glutamine synthetase, catalytic domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004356 |
glutamate-ammonia ligase activity |
|
|
| Biological Process |
GO:0006807 |
nitrogen compound metabolic process |
|
|
| HMMPfam |
PF00120 |
Gln-synt_C |
1.3e-62 |
104-350 |
| IPR008147 |
Glutamine synthetase, beta-Grasp |
| Molecular Function |
GO:0004356 |
glutamate-ammonia ligase activity |
|
|
| Biological Process |
GO:0006542 |
glutamine biosynthetic process |
|
|
| Biological Process |
GO:0006807 |
nitrogen compound metabolic process |
|
|
| HMMPfam |
PF03951 |
Gln-synt_N |
2e-19 |
20-97 |
| superfamily |
SSF54368 |
Glutamine |
1.7e-18 |
5-103 |
| IPR014746 |
Glutamine synthetase/guanido kinase, catalytic domain |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Gene3D |
G3DSA:3.30.590.10 |
no description |
1.2e-62 |
121-348 |
| IPR027302 |
Glutamine synthetase, N-terminal conserved site |
| PatternScan |
PS00180 |
GLNA_1 |
NA |
55-72 |
| IPR027303 |
Glutamine synthetase, glycine-rich site |
| PatternScan |
PS00181 |
GLNA_ATP |
NA |
237-253 |
| no_ID |
|
| HMMPanther |
PTHR20852 |
GLUTAMINE |
3.1e-188 |
9-352 |
| HMMPanther |
PTHR20852:SF14 |
GLUTAMINE |
3.1e-188 |
9-352 |
| Seg |
seg |
seg |
NA |
141-156 |
| superfamily |
SSF55931 |
Glutamine |
1.4e-68 |
103-352 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 7 | 17754744 | 17758138 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00007.1 |
maker |
exon |
2498254 |
2498393 |
. |
+ |
. |
ID=Zjn_sc00007.1.g05620.1.sm.mkhc:exon:1 |
| Zjn_sc00007.1 |
maker |
exon |
2499146 |
2499185 |
. |
+ |
. |
ID=Zjn_sc00007.1.g05620.1.sm.mkhc:exon:2 |
| Zjn_sc00007.1 |
maker |
exon |
2499364 |
2499467 |
. |
+ |
. |
ID=Zjn_sc00007.1.g05620.1.sm.mkhc:exon:3 |
| Zjn_sc00007.1 |
maker |
exon |
2499579 |
2499627 |
. |
+ |
. |
ID=Zjn_sc00007.1.g05620.1.sm.mkhc:exon:4 |
| Zjn_sc00007.1 |
maker |
exon |
2500051 |
2500157 |
. |
+ |
. |
ID=Zjn_sc00007.1.g05620.1.sm.mkhc:exon:5 |
| Zjn_sc00007.1 |
maker |
exon |
2500246 |
2500333 |
. |
+ |
. |
ID=Zjn_sc00007.1.g05620.1.sm.mkhc:exon:6 |
| Zjn_sc00007.1 |
maker |
exon |
2500439 |
2500567 |
. |
+ |
. |
ID=Zjn_sc00007.1.g05620.1.sm.mkhc:exon:7 |
| Zjn_sc00007.1 |
maker |
exon |
2500656 |
2500730 |
. |
+ |
. |
ID=Zjn_sc00007.1.g05620.1.sm.mkhc:exon:8 |
| Zjn_sc00007.1 |
maker |
exon |
2500822 |
2501073 |
. |
+ |
. |
ID=Zjn_sc00007.1.g05620.1.sm.mkhc:exon:9 |
| Zjn_sc00007.1 |
maker |
exon |
2501173 |
2501648 |
. |
+ |
. |
ID=Zjn_sc00007.1.g05620.1.sm.mkhc:exon:10 |