Z. japonica Nagirizaki
Zjn_sc00007.1.g04920.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G37810.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 297 46 262 3e-56 95.3 36.7 48.1
Subject 283 41 258
Annot | Symbols: NIP4;1, NLM4 | NOD26-like intrinsic protein 4;1 | chr5:15045232-15047807 FORWARD LENGTH=283
NR ref|XP_004953867.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 297 1 297 e-154 99.7 89.9 95.3
Subject 296 1 296
Annot PREDICTED: aquaporin NIP2-1 [Setaria italica]
IRGSP Os02t0745100-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 297 4 297 e-145 100.3 81.5 91.2
Subject 298 5 298
Annot
Sbicolor Sobic.004G238100.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 297 1 297 e-150 100 87.2 92.9
Subject 297 1 297
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00007.1.g04920.1.sm.mkhc length: 297 aa.
IPR000425 Major intrinsic protein
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00783 MINTRINSICP 3.4e-42 48-67
87-111
124-143
168-186
199-221
236-256
HMMPanther PTHR19139 AQUAPORIN 3.2e-136 5-297
HMMPfam PF00230 MIP 2.7e-53 45-253
IPR022357 Major intrinsic protein, conserved site
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
PatternScan PS00221 MIP NA 105-113
IPR023271 Aquaporin-like
Gene3D G3DSA:1.20.1080.10 no description 1.4e-76 5-263
superfamily SSF81338 Aquaporin-like 2e-59 37-273
no_ID  
HMMPanther PTHR19139:SF22 NODULIN-26-RELATED 3.2e-136 5-297
Pseudomolecule
Chromosome Start End Strand
71810504318107964+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00007.1 maker exon 2148428 2148838 . - . ID=Zjn_sc00007.1.g04920.1.sm.mkhc:exon:5
Zjn_sc00007.1 maker exon 2149236 2149297 . - . ID=Zjn_sc00007.1.g04920.1.sm.mkhc:exon:4
Zjn_sc00007.1 maker exon 2149382 2149576 . - . ID=Zjn_sc00007.1.g04920.1.sm.mkhc:exon:3
Zjn_sc00007.1 maker exon 2150787 2151011 . - . ID=Zjn_sc00007.1.g04920.1.sm.mkhc:exon:2
Zjn_sc00007.1 maker exon 2151119 2151349 . - . ID=Zjn_sc00007.1.g04920.1.sm.mkhc:exon:1

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