Z. japonica Nagirizaki
Zjn_sc00007.1.g03740.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G36270.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 343 28 327 4e-41 128.9 41.4 50.7
Subject 442 37 422
Annot | Symbols: ABI5, GIA1 | Basic-leucine zipper (bZIP) transcription factor family protein | chr2:15204980-15206571 REVERSE LENGTH=442
NR ref|XP_004954029.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 343 1 341 e-127 103.2 79 85.7
Subject 354 1 353
Annot PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 [Setaria italica]
IRGSP Os02t0766700-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 343 1 341 e-119 104.1 74.1 80.8
Subject 357 1 356
Annot
Sbicolor Sobic.004G309600.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 343 1 341 e-123 100.9 76.1 82.5
Subject 346 1 345
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00007.1.g03740.1.sm.mkhc length: 343 aa.
IPR004827 Basic-leucine zipper domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00170 bZIP_1 1.5e-12 262-315
HMMSmart SM00338 basic 1.5e-13 258-323
PatternScan PS00036 BZIP_BASIC NA 265-280
ProfileScan PS50217 BZIP 10.806 260-305
no_ID  
Coil coil coiled-coil NA 278-316
Gene3D G3DSA:1.20.5.170 no description 9.7e-14 262-316
HMMPanther PTHR22952 CAMP-RESPONSE 2.7e-172 1-338
HMMPanther PTHR22952:SF54 BZIP 2.7e-172 1-338
Seg seg seg NA 72-92
122-137
159-180
190-216
230-239
287-308
Pseudomolecule
Chromosome Start End Strand
71861061418614737-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00007.1 maker exon 1641655 1642500 . + . ID=Zjn_sc00007.1.g03740.1.sm.mkhc:exon:1
Zjn_sc00007.1 maker exon 1642926 1642997 . + . ID=Zjn_sc00007.1.g03740.1.sm.mkhc:exon:2
Zjn_sc00007.1 maker exon 1643597 1643626 . + . ID=Zjn_sc00007.1.g03740.1.sm.mkhc:exon:3
Zjn_sc00007.1 maker exon 1645165 1645241 . + . ID=Zjn_sc00007.1.g03740.1.sm.mkhc:exon:4
Zjn_sc00007.1 maker exon 1645772 1645778 . + . ID=Zjn_sc00007.1.g03740.1.sm.mkhc:exon:5

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