Z. japonica Nagirizaki
Zjn_sc00007.1.g02290.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G30440.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 625 152 493 e-146 68.6 45.1 49.9
Subject 429 1 427
Annot | Symbols: GAE1 | UDP-D-glucuronate 4-epimerase 1 | chr4:14881976-14883265 REVERSE LENGTH=429
NR ref|XP_004954186.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 625 152 486 e-170 70.2 52 53
Subject 439 1 429
Annot PREDICTED: UDP-glucuronate 4-epimerase 1 [Setaria italica]
IRGSP Os02t0791500-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 625 152 486 e-171 69.9 51.4 52.8
Subject 437 1 429
Annot
Sbicolor Sobic.004G326900.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 625 152 486 e-172 70.2 51.7 53
Subject 439 1 429
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00007.1.g02290.1.am.mk length: 625 aa.
IPR001509 NAD-dependent epimerase/dehydratase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0044237 cellular metabolic process    
Molecular Function GO:0050662 coenzyme binding    
HMMPfam PF01370 Epimerase 1.7e-23 242-389
242-389
IPR008089 Nucleotide sugar epimerase
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives    
FPrintScan PR01713 NUCEPIMERASE 7.5e-18 372-387
407-422
447-464
372-387
407-422
447-464
IPR016040 NAD(P)-binding domain
Gene3D G3DSA:3.40.50.720 no description 3.6e-19 231-336
231-336
no_ID  
Gene3D G3DSA:3.90.25.10 no description 2.1e-27 337-485
337-485
HMMPanther PTHR10366 NAD 9.4e-173 198-497
198-497
HMMPanther PTHR10366:SF42 UDP-GLUCURONATE 9.4e-173 198-497
198-497
Seg seg seg NA 10-25
39-66
81-97
113-130
188-202
390-403
515-527
581-596
10-25
39-66
81-97
113-130
188-202
390-403
515-527
581-596
superfamily SSF51735 NAD(P)-binding 1.3e-56 203-485
203-485
Pseudomolecule
Chromosome Start End Strand
71927965219282435+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00007.1 maker_non_over exon 973957 974301 . - . ID=Zjn_sc00007.1.g02290.1.am.mk:exon:13
Zjn_sc00007.1 maker_non_over exon 974362 974437 . - . ID=Zjn_sc00007.1.g02290.1.am.mk:exon:12
Zjn_sc00007.1 maker_non_over exon 974856 975412 . - . ID=Zjn_sc00007.1.g02290.1.am.mk:exon:11
Zjn_sc00007.1 maker_non_over exon 975446 975598 . - . ID=Zjn_sc00007.1.g02290.1.am.mk:exon:10
Zjn_sc00007.1 maker_non_over exon 975638 975724 . - . ID=Zjn_sc00007.1.g02290.1.am.mk:exon:9
Zjn_sc00007.1 maker_non_over exon 975767 975787 . - . ID=Zjn_sc00007.1.g02290.1.am.mk:exon:8
Zjn_sc00007.1 maker_non_over exon 975821 975901 . - . ID=Zjn_sc00007.1.g02290.1.am.mk:exon:7
Zjn_sc00007.1 maker_non_over exon 975962 975967 . - . ID=Zjn_sc00007.1.g02290.1.am.mk:exon:6
Zjn_sc00007.1 maker_non_over exon 976001 976054 . - . ID=Zjn_sc00007.1.g02290.1.am.mk:exon:5
Zjn_sc00007.1 maker_non_over exon 976094 976159 . - . ID=Zjn_sc00007.1.g02290.1.am.mk:exon:4
Zjn_sc00007.1 maker_non_over exon 976193 976250 . - . ID=Zjn_sc00007.1.g02290.1.am.mk:exon:3
Zjn_sc00007.1 maker_non_over exon 976293 976335 . - . ID=Zjn_sc00007.1.g02290.1.am.mk:exon:2
Zjn_sc00007.1 maker_non_over exon 976410 976740 . - . ID=Zjn_sc00007.1.g02290.1.am.mk:exon:1

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