Z. japonica Nagirizaki
Zjn_sc00007.1.g02090.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G25050.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 490 75 473 e-139 226.7 51.6 62.9
Subject 1111 699 1104
Annot | Symbols: | Actin-binding FH2 (Formin Homology) protein | chr2:10654108-10659383 REVERSE LENGTH=1111
NR ref|XP_012701169.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 490 40 490 0.0 392.6 81.6 86.3
Subject 1924 847 1306
Annot PREDICTED: formin-like protein 7 [Setaria italica]
IRGSP Os02t0794900-00_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 490 40 479 0.0 281.4 76.7 82.7
Subject 1379 926 1374
Annot
Sbicolor Sobic.004G329400.2.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 490 39 487 0.0 245.1 77.3 83.3
Subject 1201 701 1158
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00007.1.g02090.1.sm.mkhc length: 490 aa.
IPR015425 Formin, FH2 domain
method AccNumber shortName E-value location
HMMPfam PF02181 FH2 1.9e-94 81-445
HMMSmart SM00498 Formin 5.3e-40 78-485
ProfileScan PS51444 FH2 56.798 78-471
superfamily SSF101447 Formin 4.1e-97 33-465
IPR027643 Formin-like family, viridiplantae
Cellular Component GO:0005884 actin filament    
Biological Process GO:0045010 actin nucleation    
HMMPanther PTHR23213:SF18 FORMIN-RELATED 2.9e-191 5-471
no_ID  
Coil coil coiled-coil NA 352-373
446-476
HMMPanther PTHR23213 FORMIN-RELATED 2.9e-191 5-471
Seg seg seg NA 6-14
23-38
45-61
457-471
Pseudomolecule
Chromosome Start End Strand
71938362819389272-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00007.1 maker exon 867120 867466 . + . ID=Zjn_sc00007.1.g02090.1.sm.mkhc:exon:1
Zjn_sc00007.1 maker exon 867553 867673 . + . ID=Zjn_sc00007.1.g02090.1.sm.mkhc:exon:2
Zjn_sc00007.1 maker exon 867760 867831 . + . ID=Zjn_sc00007.1.g02090.1.sm.mkhc:exon:3
Zjn_sc00007.1 maker exon 868103 868201 . + . ID=Zjn_sc00007.1.g02090.1.sm.mkhc:exon:4
Zjn_sc00007.1 maker exon 868331 868372 . + . ID=Zjn_sc00007.1.g02090.1.sm.mkhc:exon:5
Zjn_sc00007.1 maker exon 868560 868640 . + . ID=Zjn_sc00007.1.g02090.1.sm.mkhc:exon:6
Zjn_sc00007.1 maker exon 868747 868797 . + . ID=Zjn_sc00007.1.g02090.1.sm.mkhc:exon:7
Zjn_sc00007.1 maker exon 868884 868965 . + . ID=Zjn_sc00007.1.g02090.1.sm.mkhc:exon:8
Zjn_sc00007.1 maker exon 869559 869615 . + . ID=Zjn_sc00007.1.g02090.1.sm.mkhc:exon:9
Zjn_sc00007.1 maker exon 869708 869730 . + . ID=Zjn_sc00007.1.g02090.1.sm.mkhc:exon:10
Zjn_sc00007.1 maker exon 870463 870534 . + . ID=Zjn_sc00007.1.g02090.1.sm.mkhc:exon:11
Zjn_sc00007.1 maker exon 870605 870721 . + . ID=Zjn_sc00007.1.g02090.1.sm.mkhc:exon:12
Zjn_sc00007.1 maker exon 870934 871002 . + . ID=Zjn_sc00007.1.g02090.1.sm.mkhc:exon:13
Zjn_sc00007.1 maker exon 871096 871162 . + . ID=Zjn_sc00007.1.g02090.1.sm.mkhc:exon:14
Zjn_sc00007.1 maker exon 871504 872764 . + . ID=Zjn_sc00007.1.g02090.1.sm.mkhc:exon:15

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