Z. japonica Nagirizaki
Zjn_sc00007.1.g00450.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G00430.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 290 1 290 e-140 99 82.1 90.7
Subject 287 1 287
Annot | Symbols: TMP-C, PIP1;4, PIP1E | plasma membrane intrinsic protein 1;4 | chr4:186143-187531 REVERSE LENGTH=287
NR ref|XP_004954451.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 290 1 290 e-157 99.3 94.8 97.6
Subject 288 1 288
Annot PREDICTED: aquaporin PIP1-5 [Setaria italica] gi|357529950|gb|AET81042.1| plasma membrane intrinsic protein 1 [Setaria italica]
IRGSP Os02t0823100-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 290 1 290 e-155 99.3 90.7 96.6
Subject 288 1 288
Annot
Sbicolor Sobic.004G351200.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 290 1 290 e-157 100 92.4 95.5
Subject 290 1 290
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00007.1.g00450.1.sm.mkhc length: 290 aa.
IPR000425 Major intrinsic protein
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00783 MINTRINSICP 3.8e-70 56-75
98-122
135-154
184-202
220-242
260-280
HMMPanther PTHR19139 AQUAPORIN 6.3e-222 1-290
HMMPfam PF00230 MIP 2.6e-85 48-277
HMMTigr TIGR00861 MIP: 2.6e-65 60-276
IPR022357 Major intrinsic protein, conserved site
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
PatternScan PS00221 MIP NA 116-124
IPR023271 Aquaporin-like
Gene3D G3DSA:1.20.1080.10 no description 2e-87 31-282
superfamily SSF81338 Aquaporin-like 3.1e-61 45-281
no_ID  
HMMPanther PTHR19139:SF56 SUBFAMILY 6.3e-222 1-290
Seg seg seg NA 37-48
164-171
Pseudomolecule
Chromosome Start End Strand
72008570620086921+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00007.1 maker exon 169471 169760 . - . ID=Zjn_sc00007.1.g00450.1.sm.mkhc:exon:2
Zjn_sc00007.1 maker exon 169910 170686 . - . ID=Zjn_sc00007.1.g00450.1.sm.mkhc:exon:1

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