Z. japonica Nagirizaki
Zjn_sc00006.1.g06460.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G51340.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 556 62 492 e-101 92.6 43.9 54.7
Subject 515 13 508
Annot | Symbols: | MATE efflux family protein | chr1:19032021-19034681 FORWARD LENGTH=515
NR gb|EEC72043.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 556 51 474 e-149 107.4 53.4 62.8
Subject 597 72 575
Annot hypothetical protein OsI_04949 [Oryza sativa Indica Group]
IRGSP Os01t0919100-00_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 556 19 474 e-151 109.4 54.9 65.1
Subject 608 44 586
Annot
Sbicolor Sobic.003G403000.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 556 14 473 e-144 107.9 53.8 64.9
Subject 600 40 577
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00006.1.g06460.1.am.mk length: 556 aa.
IPR002528 Multi antimicrobial extrusion protein
method AccNumber shortName E-value location
Biological Process GO:0006855 drug transmembrane transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF01554 MatE 4.7e-06 212-303
333-459
no_ID  
HMMPanther PTHR11206 MULTIDRUG 2.3e-117 21-474
HMMPanther PTHR11206:SF47 MATE 2.3e-117 21-474
Seg seg seg NA 19-24
Pseudomolecule
Chromosome Start End Strand
1264697986474767+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00006.1 maker_non_over exon 3427880 3428076 . - . ID=Zjn_sc00006.1.g06460.1.am.mk:exon:8
Zjn_sc00006.1 maker_non_over exon 3430192 3430243 . - . ID=Zjn_sc00006.1.g06460.1.am.mk:exon:7
Zjn_sc00006.1 maker_non_over exon 3430357 3430452 . - . ID=Zjn_sc00006.1.g06460.1.am.mk:exon:6
Zjn_sc00006.1 maker_non_over exon 3430835 3431023 . - . ID=Zjn_sc00006.1.g06460.1.am.mk:exon:5
Zjn_sc00006.1 maker_non_over exon 3431219 3431382 . - . ID=Zjn_sc00006.1.g06460.1.am.mk:exon:4
Zjn_sc00006.1 maker_non_over exon 3431443 3431543 . - . ID=Zjn_sc00006.1.g06460.1.am.mk:exon:3
Zjn_sc00006.1 maker_non_over exon 3431890 3432011 . - . ID=Zjn_sc00006.1.g06460.1.am.mk:exon:2
Zjn_sc00006.1 maker_non_over exon 3432100 3432849 . - . ID=Zjn_sc00006.1.g06460.1.am.mk:exon:1

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