Z. japonica Nagirizaki
Zjn_sc00006.1.g06170.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 No_hits
NR ref|XP_002438886.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 370 1 323 2e-99 145.9 52.7 64.3
Subject 540 45 367
Annot hypothetical protein SORBIDRAFT_10g027750 [Sorghum bicolor] gi|241917109|gb|EER90253.1| hypothetical protein SORBIDRAFT_10g027750 [Sorghum bicolor]
IRGSP Os02t0160200-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 370 33 323 5e-33 133.8 30.3 43.8
Subject 495 20 318
Annot
Sbicolor Sobic.010G235700.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 370 1 323 e-102 145.9 52.7 64.3
Subject 540 45 367
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00006.1.g06170.1.sm.mk length: 370 aa.
IPR001810 F-box domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 0.0012 35-77
superfamily SSF81383 F-box 5.5e-08 34-72
no_ID  
Gene3D G3DSA:3.80.10.10 no description 3.7e-09 135-325
Seg seg seg NA 84-100
156-170
Pseudomolecule
Chromosome Start End Strand
1267432396748613-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00006.1 maker_non_over exon 3154034 3155005 . + . ID=Zjn_sc00006.1.g06170.1.sm.mk:exon:1
Zjn_sc00006.1 maker_non_over exon 3155564 3155698 . + . ID=Zjn_sc00006.1.g06170.1.sm.mk:exon:2
Zjn_sc00006.1 maker_non_over exon 3159403 3159408 . + . ID=Zjn_sc00006.1.g06170.1.sm.mk:exon:3

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