Z. japonica Nagirizaki
Zjn_sc00006.1.g03880.1.am.mk
Sequence
-
BLAST
| TAIR10 |
AT3G52720.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
283 |
11 |
272 |
5e-67 |
100.4 |
41.3 |
56.9 |
| Subject |
284 |
4 |
266 |
|
| Annot |
| Symbols: CAH1, ATACA1, ACA1 | alpha carbonic anhydrase 1 | chr3:19538804-19541116 REVERSE LENGTH=284 |
| NR |
ref|XP_006653371.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
283 |
1 |
275 |
e-109 |
96.8 |
67.5 |
78.1 |
| Subject |
274 |
1 |
268 |
|
| Annot |
PREDICTED: bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3-like [Oryza brachyantha] |
| IRGSP |
Os04t0412500-01_chr04_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
283 |
1 |
282 |
e-107 |
98.2 |
65.4 |
78.8 |
| Subject |
278 |
1 |
276 |
|
| Annot |
|
| Sbicolor |
Sobic.006G069300.2.p|Chr06|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
283 |
22 |
274 |
e-105 |
102.8 |
65.7 |
75.3 |
| Subject |
291 |
28 |
283 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00006.1.g03880.1.am.mk |
length: 283 aa. |
| IPR001148 |
Alpha carbonic anhydrase |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.10.200.10 |
no description |
3.9e-61 |
26-270 |
| HMMPfam |
PF00194 |
Carb_anhydrase |
6.5e-34 |
30-269 |
| HMMSmart |
SM01057 |
Eukaryotic-type |
2.7e-64 |
29-272 |
| ProfileScan |
PS51144 |
ALPHA_CA_2 |
46.732 |
27-272 |
| superfamily |
SSF51069 |
Carbonic |
6.3e-64 |
26-273 |
| IPR018338 |
Carbonic anhydrase, alpha-class, conserved site |
| Molecular Function |
GO:0004089 |
carbonate dehydratase activity |
|
|
| Biological Process |
GO:0006730 |
one-carbon metabolic process |
|
|
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| PatternScan |
PS00162 |
ALPHA_CA_1 |
NA |
130-146 |
| IPR023561 |
Carbonic anhydrase, alpha-class |
| HMMPanther |
PTHR18952 |
CARBONIC |
5.6e-85 |
26-272 |
| no_ID |
|
| HMMPanther |
PTHR18952:SF2 |
CARBONIC |
5.6e-85 |
26-272 |
| ProfileScan |
PS51257 |
PROKAR_LIPOPROTEIN |
5.000 |
1-25 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 12 | 8036788 | 8038206 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00006.1 |
maker_non_over |
exon |
1864441 |
1864593 |
. |
- |
. |
ID=Zjn_sc00006.1.g03880.1.am.mk:exon:6 |
| Zjn_sc00006.1 |
maker_non_over |
exon |
1864708 |
1864890 |
. |
- |
. |
ID=Zjn_sc00006.1.g03880.1.am.mk:exon:5 |
| Zjn_sc00006.1 |
maker_non_over |
exon |
1865029 |
1865131 |
. |
- |
. |
ID=Zjn_sc00006.1.g03880.1.am.mk:exon:4 |
| Zjn_sc00006.1 |
maker_non_over |
exon |
1865235 |
1865347 |
. |
- |
. |
ID=Zjn_sc00006.1.g03880.1.am.mk:exon:3 |
| Zjn_sc00006.1 |
maker_non_over |
exon |
1865432 |
1865658 |
. |
- |
. |
ID=Zjn_sc00006.1.g03880.1.am.mk:exon:2 |
| Zjn_sc00006.1 |
maker_non_over |
exon |
1865787 |
1865859 |
. |
- |
. |
ID=Zjn_sc00006.1.g03880.1.am.mk:exon:1 |