Z. japonica Nagirizaki
Zjn_sc00006.1.g01560.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G12900.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 390 1 390 0.0 102.3 85.9 93.8
Subject 399 8 399
Annot | Symbols: GAPA-2 | glyceraldehyde 3-phosphate dehydrogenase A subunit 2 | chr1:4392634-4394283 REVERSE LENGTH=399
NR ref|XP_004975847.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 390 1 390 0.0 102.8 93.3 98.5
Subject 401 1 401
Annot PREDICTED: glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic [Setaria italica]
IRGSP Os04t0459500-02_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 390 1 390 0.0 103.1 93.6 98.5
Subject 402 1 402
Annot
Sbicolor Sobic.006G105900.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 390 2 390 0.0 107.2 91.3 97.4
Subject 418 24 418
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00006.1.g01560.1.sm.mk length: 390 aa.
IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I
method AccNumber shortName E-value location
Biological Process GO:0006006 glucose metabolic process    
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    
Molecular Function GO:0050661 NADP binding    
Molecular Function GO:0051287 NAD binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMTigr TIGR01534 GAPDH-I: 5.3e-130 57-380
IPR016040 NAD(P)-binding domain
Gene3D G3DSA:3.40.50.720 no description 2e-67 54-215
IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF00044 Gp_dh_N 1.2e-52 57-207
HMMSmart SM00846 Glyceraldehyde 1.9e-77 56-207
IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF02800 Gp_dh_C 1.4e-67 212-368
IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS00071 GAPDH NA 205-212
IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00078 G3PDHDRGNASE 6.2e-40 165-178
201-219
228-244
284-301
324-339
HMMPIR PIRSF000149 Glyceraldehyde-3-phosphate 7.6e-175 54-390
HMMPanther PTHR10836 GLYCERALDEHYDE 1.4e-191 36-389
no_ID  
Gene3D G3DSA:3.30.360.10 no description 1.8e-70 216-370
Seg seg seg NA 241-258
294-303
superfamily SSF51735 NAD(P)-binding 1.8e-59 56-229
superfamily SSF55347 Glyceraldehyde-3-phosphate 8.9e-77 207-369
Pseudomolecule
Chromosome Start End Strand
1292195509220922+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00006.1 maker_non_over exon 681725 682227 . - . ID=Zjn_sc00006.1.g01560.1.sm.mk:exon:3
Zjn_sc00006.1 maker_non_over exon 682318 682867 . - . ID=Zjn_sc00006.1.g01560.1.sm.mk:exon:2
Zjn_sc00006.1 maker_non_over exon 682978 683097 . - . ID=Zjn_sc00006.1.g01560.1.sm.mk:exon:1

Top