Z. japonica Nagirizaki
Zjn_sc00006.1.g00630.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G35260.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 417 44 417 0.0 88 75.1 80.8
Subject 367 1 367
Annot | Symbols: IDH1, IDH-I | isocitrate dehydrogenase 1 | chr4:16774494-16776233 REVERSE LENGTH=367
NR ref|XP_004975968.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 417 44 417 0.0 90.4 83.9 87.5
Subject 377 1 377
Annot PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial-like isoform X1 [Setaria italica]
IRGSP Os04t0479200-01_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 417 44 417 0.0 89.4 83.7 85.9
Subject 373 1 373
Annot
Sbicolor Sobic.006G120900.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 417 44 417 0.0 89.9 83 85.9
Subject 375 1 375
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00006.1.g00630.1.am.mkhc length: 417 aa.
IPR001804 Isocitrate and isopropylmalate dehydrogenases family
method AccNumber shortName E-value location
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Molecular Function GO:0051287 NAD binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPanther PTHR11835 DECARBOXYLATING 8.4e-192 71-417
IPR004434 Isocitrate dehydrogenase NAD-dependent
Molecular Function GO:0004449 isocitrate dehydrogenase (NAD+) activity    
Biological Process GO:0006099 tricarboxylic acid cycle    
Biological Process GO:0055114 oxidation-reduction process    
HMMTigr TIGR00175 mito_nad_idh: 8.9e-157 86-416
IPR024084 Isopropylmalate dehydrogenase-like domain
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:3.40.718.10 no description 3.8e-125 89-416
HMMPfam PF00180 Iso_dh 6.6e-78 90-412
no_ID  
HMMPanther PTHR11835:SF1 ISOCITRATE 8.4e-192 71-417
Seg seg seg NA 2-32
45-74
316-330
superfamily SSF53659 Isocitrate/Isopropylmalate 1.7e-107 86-416
Pseudomolecule
Chromosome Start End Strand
1296512179655444-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00006.1 maker exon 247203 247862 . + . ID=Zjn_sc00006.1.g00630.1.am.mkhc:exon:1
Zjn_sc00006.1 maker exon 248920 249159 . + . ID=Zjn_sc00006.1.g00630.1.am.mkhc:exon:2
Zjn_sc00006.1 maker exon 249794 249872 . + . ID=Zjn_sc00006.1.g00630.1.am.mkhc:exon:3
Zjn_sc00006.1 maker exon 250169 251430 . + . ID=Zjn_sc00006.1.g00630.1.am.mkhc:exon:4

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