Z. japonica Nagirizaki
Zjn_sc00005.1.g08410.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G20050.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 228 57 217 7e-41 97.8 41.2 53.9
Subject 223 4 204
Annot | Symbols: HYD1 | C-8,7 sterol isomerase | chr1:6949160-6950135 FORWARD LENGTH=223
NR ref|XP_004967912.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 228 57 228 9e-81 93.9 67.5 71.5
Subject 214 1 214
Annot PREDICTED: probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase [Setaria italica]
IRGSP Os01t0103600-02_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 228 59 228 4e-74 96.1 61.4 67.1
Subject 219 7 219
Annot
Sbicolor Sobic.003G107400.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 228 57 228 6e-82 93.9 66.2 70.6
Subject 214 1 214
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00005.1.g08410.1.sm.mkhc length: 228 aa.
IPR007905 Emopamil-binding
method AccNumber shortName E-value location
Cellular Component GO:0005783 endoplasmic reticulum    
Cellular Component GO:0016021 integral to membrane    
Biological Process GO:0016125 sterol metabolic process    
Molecular Function GO:0047750 cholestenol delta-isomerase activity    
HMMPanther PTHR14207 STEROL 9.7e-44 52-223
HMMPfam PF05241 EBP 2.5e-09 84-186
187-224
no_ID  
Seg seg seg NA 89-100
Pseudomolecule
Chromosome Start End Strand
617677341769861-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00005.1 maker exon 5354175 5354237 . + . ID=Zjn_sc00005.1.g08410.1.sm.mkhc:exon:1
Zjn_sc00005.1 maker exon 5354265 5354502 . + . ID=Zjn_sc00005.1.g08410.1.sm.mkhc:exon:2
Zjn_sc00005.1 maker exon 5354743 5354889 . + . ID=Zjn_sc00005.1.g08410.1.sm.mkhc:exon:3
Zjn_sc00005.1 maker exon 5354969 5355077 . + . ID=Zjn_sc00005.1.g08410.1.sm.mkhc:exon:4
Zjn_sc00005.1 maker exon 5356173 5356302 . + . ID=Zjn_sc00005.1.g08410.1.sm.mkhc:exon:5

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