Z. japonica Nagirizaki
Zjn_sc00005.1.g07950.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G48230.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 303 1 277 e-119 131.4 68.3 78.5
Subject 398 51 330
Annot | Symbols: EMB1276, ACAT2 | acetoacetyl-CoA thiolase 2 | chr5:19552570-19555030 REVERSE LENGTH=398
NR ref|NP_001141874.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 303 1 264 e-143 138.9 81.5 84.8
Subject 421 65 328
Annot acetyl-CoA acetyltransferase, cytosolic 2 isoform 1 [Zea mays] gi|670427759|ref|XP_008654617.1| PREDICTED: acetyl-CoA acetyltransferase, cytosolic 2 isoform 1 isoform X1 [Zea mays] gi|194706258|gb|ACF87213.1| unknown [Zea mays] gi|195640758|gb|ACG39847.1| acetyl-CoA acetyltransferase, cytosolic 2 [Zea mays] gi|238007216|gb|ACR34643.1| unknown [Zea mays] gi|413947147|gb|AFW79796.1| acetyl-CoA acetyltransferase, cytosolic 2 isoform 1 [Zea mays] gi|413947148|gb|AFW79797.1| acetyl-CoA acetyltransferase, cytosolic 2 isoform 2 [Zea mays]
IRGSP Os01t0110400-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 303 1 277 e-140 137.3 79.2 85.8
Subject 416 60 338
Annot
Sbicolor Sobic.003G100800.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 303 1 264 e-146 138.9 81.2 85.1
Subject 421 65 328
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00005.1.g07950.1.sm.mkhc length: 303 aa.
IPR002155 Thiolase
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups    
HMMPanther PTHR18919 ACETYL-COA 2.8e-140 2-264
HMMTigr TIGR01930 AcCoA-C-Actrans: 1.7e-76 2-264
IPR016038 Thiolase-like, subgroup
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.47.10 no description 3e-16 148-230
231-264
IPR016039 Thiolase-like
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
superfamily SSF53901 Thiolase-like 3.4e-07 2-224
222-264
IPR020615 Thiolase, acyl-enzyme intermediate active site
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups    
PatternScan PS00098 THIOLASE_1 NA 38-56
IPR020616 Thiolase, N-terminal
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups    
HMMPfam PF00108 Thiolase_N 5.4e-77 2-215
IPR020617 Thiolase, C-terminal
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups    
HMMPfam PF02803 Thiolase_C 1.9e-05 225-265
no_ID  
HMMPanther PTHR18919:SF7 ACETYL-COA 2.8e-140 2-264
Pseudomolecule
Chromosome Start End Strand
619793861983451+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00005.1 maker exon 5140585 5140665 . - . ID=Zjn_sc00005.1.g07950.1.sm.mkhc:exon:10
Zjn_sc00005.1 maker exon 5141183 5141221 . - . ID=Zjn_sc00005.1.g07950.1.sm.mkhc:exon:9
Zjn_sc00005.1 maker exon 5142371 5142448 . - . ID=Zjn_sc00005.1.g07950.1.sm.mkhc:exon:8
Zjn_sc00005.1 maker exon 5142604 5142703 . - . ID=Zjn_sc00005.1.g07950.1.sm.mkhc:exon:7
Zjn_sc00005.1 maker exon 5143514 5143596 . - . ID=Zjn_sc00005.1.g07950.1.sm.mkhc:exon:6
Zjn_sc00005.1 maker exon 5143756 5143821 . - . ID=Zjn_sc00005.1.g07950.1.sm.mkhc:exon:5
Zjn_sc00005.1 maker exon 5143890 5143967 . - . ID=Zjn_sc00005.1.g07950.1.sm.mkhc:exon:4
Zjn_sc00005.1 maker exon 5144053 5144191 . - . ID=Zjn_sc00005.1.g07950.1.sm.mkhc:exon:3
Zjn_sc00005.1 maker exon 5144270 5144375 . - . ID=Zjn_sc00005.1.g07950.1.sm.mkhc:exon:2
Zjn_sc00005.1 maker exon 5144509 5144650 . - . ID=Zjn_sc00005.1.g07950.1.sm.mkhc:exon:1

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