Z. japonica Nagirizaki
Zjn_sc00005.1.g05450.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G37090.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 315 11 285 3e-42 111.4 34.9 50.8
Subject 351 1 296
Annot | Symbols: IRX9 | Nucleotide-diphospho-sugar transferases superfamily protein | chr2:15587671-15589223 REVERSE LENGTH=351
NR ref|XP_012701390.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 315 11 300 e-102 114 67.3 76.2
Subject 359 1 292
Annot PREDICTED: LOW QUALITY PROTEIN: probable glucuronosyltransferase Os01g0157700 [Setaria italica]
IRGSP Os01t0157700-00_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 315 9 200 1e-61 73.7 39.4 44.1
Subject 232 3 193
Annot
Sbicolor Sobic.003G063400.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 315 11 300 e-101 133.3 63.8 72.1
Subject 420 1 296
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00005.1.g05450.1.sm.mk length: 315 aa.
IPR005027 Glycosyl transferase, family 43
method AccNumber shortName E-value location
Molecular Function GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity    
Cellular Component GO:0016020 membrane    
HMMPanther PTHR10896 GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 2.9e-65 3-285
HMMPfam PF03360 Glyco_transf_43 3.2e-30 102-294
no_ID  
Gene3D G3DSA:3.90.550.10 no description 1.1e-48 80-297
HMMPanther PTHR10896:SF1 BETA-1,3-GLUCURONYLTRANSFERASE 2.9e-65 3-285
Seg seg seg NA 259-267
superfamily SSF53448 Nucleotide-diphospho-sugar 2.1e-44 79-285
Pseudomolecule
Chromosome Start End Strand
631761233177366+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00005.1 maker_non_over exon 3946670 3946717 . - . ID=Zjn_sc00005.1.g05450.1.sm.mk:exon:3
Zjn_sc00005.1 maker_non_over exon 3946834 3947134 . - . ID=Zjn_sc00005.1.g05450.1.sm.mk:exon:2
Zjn_sc00005.1 maker_non_over exon 3947315 3947913 . - . ID=Zjn_sc00005.1.g05450.1.sm.mk:exon:1

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