Z. japonica Nagirizaki
Zjn_sc00005.1.g05320.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G54960.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 428 52 310 e-105 141.8 43.7 51.2
Subject 607 1 266
Annot | Symbols: PDC2 | pyruvate decarboxylase-2 | chr5:22310858-22312681 REVERSE LENGTH=607
NR gb|AFW80093.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 428 3 311 e-124 149.5 56.8 61
Subject 640 23 300
Annot pyruvate decarboxylase2 [Zea mays]
IRGSP Os01t0160100-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 428 52 339 e-125 139.5 54.9 58.9
Subject 597 1 276
Annot
Sbicolor Sobic.003G061300.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 428 52 311 e-121 138.1 53 55.8
Subject 591 1 251
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00005.1.g05320.1.am.mk length: 428 aa.
IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain
method AccNumber shortName E-value location
Molecular Function GO:0030976 thiamine pyrophosphate binding    
HMMPfam PF02776 TPP_enzyme_N 1.3e-36 85-256
IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme
HMMPanther PTHR18968:SF4 PYRUVATE 1.5e-105 77-319
no_ID  
Gene3D G3DSA:3.40.50.970 no description 4.2e-25 84-269
304-414
HMMPanther PTHR18968 THIAMINE 1.5e-105 77-319
Seg seg seg NA 30-51
61-81
137-163
284-292
376-387
superfamily SSF52518 Thiamin 4e-22 83-273
227-428
Pseudomolecule
Chromosome Start End Strand
632333053236583-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00005.1 maker_non_over exon 3887453 3888115 . + . ID=Zjn_sc00005.1.g05320.1.am.mk:exon:1
Zjn_sc00005.1 maker_non_over exon 3888890 3889053 . + . ID=Zjn_sc00005.1.g05320.1.am.mk:exon:2
Zjn_sc00005.1 maker_non_over exon 3889148 3889247 . + . ID=Zjn_sc00005.1.g05320.1.am.mk:exon:3
Zjn_sc00005.1 maker_non_over exon 3890296 3890484 . + . ID=Zjn_sc00005.1.g05320.1.am.mk:exon:4
Zjn_sc00005.1 maker_non_over exon 3890561 3890731 . + . ID=Zjn_sc00005.1.g05320.1.am.mk:exon:5

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