Z. japonica Nagirizaki
Zjn_sc00005.1.g04970.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G70560.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 582 151 582 2e-83 67.2 29.4 40.7
Subject 391 22 384
Annot | Symbols: WEI8, TAA1, SAV3 | tryptophan aminotransferase of Arabidopsis 1 | chr1:26604894-26607319 FORWARD LENGTH=391
NR ref|NP_001054761.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 582 73 582 e-145 75.8 48.5 56.7
Subject 441 24 441
Annot Os05g0169300 [Oryza sativa Japonica Group] gi|113578312|dbj|BAF16675.1| Os05g0169300 [Oryza sativa Japonica Group] gi|215701206|dbj|BAG92630.1| unnamed protein product [Oryza sativa Japonica Group]
IRGSP Os05t0169300-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 582 73 582 e-148 75.8 48.5 56.7
Subject 441 24 441
Annot
Sbicolor Sobic.003G052700.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 582 324 582 e-131 92.4 38.3 41.4
Subject 538 282 538
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00005.1.g04970.1.am.mk length: 582 aa.
IPR006947 EGF-like, alliinase
method AccNumber shortName E-value location
Molecular Function GO:0016846 carbon-sulfur lyase activity    
Gene3D G3DSA:2.10.25.30 no description 2e-16 148-195
IPR006948 Allinase, C-terminal
Molecular Function GO:0016846 carbon-sulfur lyase activity    
HMMPfam PF04864 Alliinase_C 4.7e-104 154-259
326-581
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 4.3e-51 326-461
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 5e-43 473-581
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 5.6e-15 327-581
96-260
no_ID  
HMMPanther PTHR11751 SUBGROUP 1.5e-168 151-581
HMMPanther PTHR11751:SF127SUBFAMILY NOT 1.5e-168 151-581
Seg seg seg NA 102-116
278-290
Pseudomolecule
Chromosome Start End Strand
634210543425801-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00005.1 maker_non_over exon 3698235 3698238 . + . ID=Zjn_sc00005.1.g04970.1.am.mk:exon:1
Zjn_sc00005.1 maker_non_over exon 3699977 3700445 . + . ID=Zjn_sc00005.1.g04970.1.am.mk:exon:2
Zjn_sc00005.1 maker_non_over exon 3700824 3701127 . + . ID=Zjn_sc00005.1.g04970.1.am.mk:exon:3
Zjn_sc00005.1 maker_non_over exon 3701335 3701535 . + . ID=Zjn_sc00005.1.g04970.1.am.mk:exon:4
Zjn_sc00005.1 maker_non_over exon 3702043 3702323 . + . ID=Zjn_sc00005.1.g04970.1.am.mk:exon:5
Zjn_sc00005.1 maker_non_over exon 3702397 3702701 . + . ID=Zjn_sc00005.1.g04970.1.am.mk:exon:6
Zjn_sc00005.1 maker_non_over exon 3702798 3702982 . + . ID=Zjn_sc00005.1.g04970.1.am.mk:exon:7

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