Z. japonica Nagirizaki
Zjn_sc00005.1.g04110.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G74320.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 450 126 450 e-110 77.8 43.3 54.9
Subject 350 16 347
Annot | Symbols: | Protein kinase superfamily protein | chr1:27941192-27942903 FORWARD LENGTH=350
NR ref|XP_012701249.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 450 102 450 e-176 104.7 68.4 72.2
Subject 471 111 471
Annot PREDICTED: probable choline kinase 2 [Setaria italica]
IRGSP Os01t0183000-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 450 102 449 e-162 81.6 65.3 71.1
Subject 367 1 364
Annot
Sbicolor Sobic.003G040700.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 450 71 450 e-177 86.9 70.2 74.7
Subject 391 8 391
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00005.1.g04110.1.sm.mkhc length: 450 aa.
IPR011009 Protein kinase-like domain
method AccNumber shortName E-value location
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups    
superfamily SSF56112 Protein 4.6e-91 107-446
IPR026712 Choline/Ethanolamine kinase
Molecular Function GO:0016301 kinase activity    
Biological Process GO:0046474 glycerophospholipid biosynthetic process    
HMMPanther PTHR22603 CHOLINE/ETHANOALAMINE 2.1e-123 107-447
no_ID  
Coil coil coiled-coil NA 286-307
Gene3D G3DSA:3.10.450.110 no description 2.1e-17 126-215
Gene3D G3DSA:3.90.1200.10 no description 5.3e-75 216-446
HMMPfam PF01633 Choline_kinase 3.5e-58 177-368
Seg seg seg NA 12-23
89-97
98-117
Pseudomolecule
Chromosome Start End Strand
638985083903384+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00005.1 maker exon 3220652 3221562 . - . ID=Zjn_sc00005.1.g04110.1.sm.mkhc:exon:9
Zjn_sc00005.1 maker exon 3221791 3222017 . - . ID=Zjn_sc00005.1.g04110.1.sm.mkhc:exon:8
Zjn_sc00005.1 maker exon 3222126 3222229 . - . ID=Zjn_sc00005.1.g04110.1.sm.mkhc:exon:7
Zjn_sc00005.1 maker exon 3222335 3222382 . - . ID=Zjn_sc00005.1.g04110.1.sm.mkhc:exon:6
Zjn_sc00005.1 maker exon 3222482 3222599 . - . ID=Zjn_sc00005.1.g04110.1.sm.mkhc:exon:5
Zjn_sc00005.1 maker exon 3223125 3223308 . - . ID=Zjn_sc00005.1.g04110.1.sm.mkhc:exon:4
Zjn_sc00005.1 maker exon 3223410 3223516 . - . ID=Zjn_sc00005.1.g04110.1.sm.mkhc:exon:3
Zjn_sc00005.1 maker exon 3223615 3224195 . - . ID=Zjn_sc00005.1.g04110.1.sm.mkhc:exon:2
Zjn_sc00005.1 maker exon 3225420 3225528 . - . ID=Zjn_sc00005.1.g04110.1.sm.mkhc:exon:1

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