Z. japonica Nagirizaki
Zjn_sc00005.1.g04040.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G02760.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 111 1 111 1e-51 136.9 91 98.2
Subject 152 1 152
Annot | Symbols: ATUBC2, UBC2 | ubiquiting-conjugating enzyme 2 | chr2:774271-775149 FORWARD LENGTH=152
NR gb|KGN51891.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 111 1 111 2e-51 136.9 92.8 98.2
Subject 152 20 152
Annot hypothetical protein Csa_5G604360 [Cucumis sativus]
IRGSP Os05t0182500-02_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 111 1 111 7e-54 136.9 95.5 99.1
Subject 152 1 152
Annot
Sbicolor Sobic.003G039200.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 111 1 111 1e-53 160.4 95.5 98.2
Subject 178 27 178
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00005.1.g04040.1.sm.mkhc length: 111 aa.
IPR000608 Ubiquitin-conjugating enzyme, E2
method AccNumber shortName E-value location
Molecular Function GO:0016881 acid-amino acid ligase activity    
HMMPfam PF00179 UQ_con 4.5e-05 8-69
70-103
ProfileScan PS50127 UBIQUITIN_CONJUGAT_2 21.333 7-111
IPR016135 Ubiquitin-conjugating enzyme/RWD-like
Gene3D G3DSA:3.10.110.10 no description 3.4e-10 1-69
70-106
superfamily SSF54495 UBC-like 8.6e-35 2-110
no_ID  
HMMPanther PTHR24067 UBIQUITIN-CONJUGATING 3.5e-54 1-108
HMMPanther PTHR24067:SF26 UBIQUITIN-CONJUGATING 3.5e-54 1-108
HMMSmart SM00212 Ubiquitin-conjugating 2.7e-19 7-109
Pseudomolecule
Chromosome Start End Strand
639268113930685+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00005.1 maker exon 3193351 3193785 . - . ID=Zjn_sc00005.1.g04040.1.sm.mkhc:exon:5
Zjn_sc00005.1 maker exon 3194907 3194962 . - . ID=Zjn_sc00005.1.g04040.1.sm.mkhc:exon:4
Zjn_sc00005.1 maker exon 3195762 3195787 . - . ID=Zjn_sc00005.1.g04040.1.sm.mkhc:exon:3
Zjn_sc00005.1 maker exon 3195875 3196011 . - . ID=Zjn_sc00005.1.g04040.1.sm.mkhc:exon:2
Zjn_sc00005.1 maker exon 3196338 3197225 . - . ID=Zjn_sc00005.1.g04040.1.sm.mkhc:exon:1

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