Z. japonica Nagirizaki
Zjn_sc00005.1.g03460.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G26200.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 455 17 448 e-176 98.2 67.5 76.9
Subject 447 18 443
Annot | Symbols: ACS7, ATACS7 | 1-amino-cyclopropane-1-carboxylate synthase 7 | chr4:13275307-13276946 FORWARD LENGTH=447
NR ref|XP_006643867.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 455 1 451 0.0 100.4 86.4 91.6
Subject 457 1 448
Annot PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 7-like [Oryza brachyantha]
IRGSP Os05t0319200-00_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 455 1 451 0.0 109 79.6 84.8
Subject 496 1 466
Annot
Sbicolor Sobic.003G033900.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 455 1 455 0.0 101.8 88.1 91.4
Subject 463 1 456
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00005.1.g03460.1.sm.mkhc length: 455 aa.
IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
PatternScan PS00105 AA_TRANSFER_CLASS_1 NA 287-300
IPR004839 Aminotransferase, class I/classII
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00155 Aminotran_1_2 5.7e-93 54-442
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 2.2e-62 99-310
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 7.4e-18 311-447
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 1.7e-112 16-450
no_ID  
FPrintScan PR00753 ACCSYNTHASE 1.8e-83 56-82
130-150
152-173
206-230
242-265
281-305
313-336
HMMPanther PTHR11751 SUBGROUP 5.4e-197 26-452
HMMPanther PTHR11751:SF26 ACC 5.4e-197 26-452
Seg seg seg NA 78-91
193-205
Pseudomolecule
Chromosome Start End Strand
643370764338817-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00005.1 maker exon 2785219 2785669 . + . ID=Zjn_sc00005.1.g03460.1.sm.mkhc:exon:1
Zjn_sc00005.1 maker exon 2785777 2785937 . + . ID=Zjn_sc00005.1.g03460.1.sm.mkhc:exon:2
Zjn_sc00005.1 maker exon 2786087 2786960 . + . ID=Zjn_sc00005.1.g03460.1.sm.mkhc:exon:3

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