Z. japonica Nagirizaki
Zjn_sc00005.1.g02810.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT5G26600.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
462 |
44 |
423 |
e-146 |
102.8 |
53.2 |
64.3 |
| Subject |
475 |
66 |
438 |
|
| Annot |
| Symbols: | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr5:9377455-9378882 FORWARD LENGTH=475 |
| NR |
ref|NP_001151142.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
462 |
15 |
445 |
0.0 |
101.7 |
81 |
84.6 |
| Subject |
470 |
15 |
442 |
|
| Annot |
Zea CEFD homolog1 [Zea mays] gi|195644574|gb|ACG41755.1| isopenicillin N epimerase [Zea mays] gi|414877132|tpg|DAA54263.1| TPA: isopenicillin N epimerase isoform 1 [Zea mays] gi|414877133|tpg|DAA54264.1| TPA: isopenicillin N epimerase isoform 2 [Zea mays] |
| IRGSP |
Os01t0290100-01_chr01_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
462 |
31 |
423 |
0.0 |
104.3 |
74.5 |
79.7 |
| Subject |
482 |
45 |
437 |
|
| Annot |
|
| Sbicolor |
Sobic.003G138900.2.p|Chr03|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
462 |
23 |
445 |
0.0 |
103.2 |
78.6 |
81.6 |
| Subject |
477 |
35 |
448 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00005.1.g02810.1.sm.mkhc |
length: 462 aa. |
| IPR000192 |
Aminotransferase, class V/Cysteine desulfurase |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0008152 |
metabolic process |
|
|
| HMMPfam |
PF00266 |
Aminotran_5 |
3.5e-19 |
89-350 |
| IPR015421 |
Pyridoxal phosphate-dependent transferase, major region, subdomain 1 |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Molecular Function |
GO:0030170 |
pyridoxal phosphate binding |
|
|
| Gene3D |
G3DSA:3.40.640.10 |
no description |
9.2e-45 |
63-325 |
| IPR015424 |
Pyridoxal phosphate-dependent transferase |
| superfamily |
SSF53383 |
PLP-dependent |
3.2e-51 |
33-410 |
| no_ID |
|
| HMMPanther |
PTHR11601 |
CYSTEINE |
2e-98 |
29-408 |
| HMMPanther |
PTHR11601:SF13 |
SUBFAMILY |
2e-98 |
29-408 |
| Seg |
seg |
seg |
NA |
4-12 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 6 | 4775977 | 4779962 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00005.1 |
maker |
exon |
2344074 |
2345341 |
. |
+ |
. |
ID=Zjn_sc00005.1.g02810.1.sm.mkhc:exon:1 |
| Zjn_sc00005.1 |
maker |
exon |
2347324 |
2348059 |
. |
+ |
. |
ID=Zjn_sc00005.1.g02810.1.sm.mkhc:exon:2 |