Z. japonica Nagirizaki
Zjn_sc00005.1.g02790.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G62130.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 570 7 444 e-148 79.6 45.3 56
Subject 454 7 446
Annot | Symbols: | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr3:23004994-23006358 FORWARD LENGTH=454
NR ref|XP_004967618.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 570 4 440 0.0 80.7 66.1 69.6
Subject 460 8 442
Annot PREDICTED: putative L-cysteine desulfhydrase 1 [Setaria italica]
IRGSP Os01t0290100-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 570 22 440 0.0 84.6 57.7 64.9
Subject 482 47 463
Annot
Sbicolor Sobic.003G139000.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 570 4 440 0.0 80.9 63.3 68.4
Subject 461 8 443
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00005.1.g02790.1.am.mkhc length: 570 aa.
IPR000192 Aminotransferase, class V/Cysteine desulfurase
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
HMMPfam PF00266 Aminotran_5 3.4e-18 77-268
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 2.3e-43 50-288
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 2e-53 22-441
no_ID  
HMMPanther PTHR11601 CYSTEINE 2.7e-103 22-441
HMMPanther PTHR11601:SF13 SUBFAMILY 2.7e-103 22-441
Seg seg seg NA 81-97
176-194
454-473
Pseudomolecule
Chromosome Start End Strand
647843784796520+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00005.1 maker exon 2327516 2328042 . - . ID=Zjn_sc00005.1.g02790.1.am.mkhc:exon:7
Zjn_sc00005.1 maker exon 2333436 2333632 . - . ID=Zjn_sc00005.1.g02790.1.am.mkhc:exon:6
Zjn_sc00005.1 maker exon 2333737 2333813 . - . ID=Zjn_sc00005.1.g02790.1.am.mkhc:exon:5
Zjn_sc00005.1 maker exon 2334073 2334845 . - . ID=Zjn_sc00005.1.g02790.1.am.mkhc:exon:4
Zjn_sc00005.1 maker exon 2334873 2335095 . - . ID=Zjn_sc00005.1.g02790.1.am.mkhc:exon:3
Zjn_sc00005.1 maker exon 2336046 2336135 . - . ID=Zjn_sc00005.1.g02790.1.am.mkhc:exon:2
Zjn_sc00005.1 maker exon 2338338 2339658 . - . ID=Zjn_sc00005.1.g02790.1.am.mkhc:exon:1

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