Z. japonica Nagirizaki
Zjn_sc00005.1.g01690.1.am.mkhc ( /TE )
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G17390.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 653 262 653 0.0 60.2 55 57.6
Subject 393 1 393
Annot | Symbols: MTO3, SAMS3, MAT4 | S-adenosylmethionine synthetase family protein | chr3:5952484-5953665 REVERSE LENGTH=393
NR ref|NP_001132867.2| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 653 260 653 0.0 60.3 58.5 59.7
Subject 394 1 394
Annot uncharacterized protein LOC100194360 [Zea mays] gi|238908744|gb|ACF81892.2| unknown [Zea mays] gi|414877311|tpg|DAA54442.1| TPA: hypothetical protein ZEAMMB73_685440 [Zea mays]
IRGSP Os01t0323600-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 653 260 653 0.0 60.3 57.3 59.4
Subject 394 1 394
Annot
Sbicolor Sobic.003G151600.2.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 653 260 653 0.0 60.3 58.8 59.6
Subject 394 1 394
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00005.1.g01690.1.am.mkhc length: 653 aa.
IPR002133 S-adenosylmethionine synthetase
method AccNumber shortName E-value location
Molecular Function GO:0004478 methionine adenosyltransferase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006556 S-adenosylmethionine biosynthetic process    
HAMAP MF_00086 S_AdoMet_synth1 50.621 263-653
HMMPanther PTHR11964 S-ADENOSYLMETHIONINE 0 250-652
HMMTigr TIGR01034 metK: 2.5e-164 266-648
IPR022628 S-adenosylmethionine synthetase, N-terminal
Molecular Function GO:0004478 methionine adenosyltransferase activity    
Biological Process GO:0006556 S-adenosylmethionine biosynthetic process    
HMMPfam PF00438 S-AdoMet_synt_N 7.6e-42 264-362
IPR022629 S-adenosylmethionine synthetase, central domain
Molecular Function GO:0004478 methionine adenosyltransferase activity    
Biological Process GO:0006556 S-adenosylmethionine biosynthetic process    
HMMPfam PF02772 S-AdoMet_synt_M 5.7e-49 377-499
IPR022630 S-adenosylmethionine synthetase, C-terminal
Molecular Function GO:0004478 methionine adenosyltransferase activity    
Biological Process GO:0006556 S-adenosylmethionine biosynthetic process    
HMMPfam PF02773 S-AdoMet_synt_C 3.1e-67 501-641
IPR022631 S-adenosylmethionine synthetase, conserved site
Molecular Function GO:0004478 methionine adenosyltransferase activity    
Biological Process GO:0006556 S-adenosylmethionine biosynthetic process    
PatternScan PS00376 ADOMET_SYNTHASE_1 NA 380-390
PatternScan PS00377 ADOMET_SYNTHASE_2 NA 527-535
IPR022636 S-adenosylmethionine synthetase superfamily
Molecular Function GO:0004478 methionine adenosyltransferase activity    
Biological Process GO:0006556 S-adenosylmethionine biosynthetic process    
superfamily SSF55973 S-adenosylmethionine 4.8e-46 501-648
377-500
263-364
no_ID  
Gene3D G3DSA:3.30.300.10 no description 8.8e-60 272-399
400-501
512-650
HMMPanther PTHR11964:SF0 SUBFAMILY 0 250-652
Seg seg seg NA 23-36
109-125
208-220
521-533
Pseudomolecule
Chromosome Start End Strand
655131035518099-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00005.1 maker exon 1605937 1605982 . + . ID=Zjn_sc00005.1.g01690.1.am.mkhc:exon:1
Zjn_sc00005.1 maker exon 1606614 1606694 . + . ID=Zjn_sc00005.1.g01690.1.am.mkhc:exon:2
Zjn_sc00005.1 maker exon 1607479 1607701 . + . ID=Zjn_sc00005.1.g01690.1.am.mkhc:exon:3
Zjn_sc00005.1 maker exon 1608817 1608915 . + . ID=Zjn_sc00005.1.g01690.1.am.mkhc:exon:4
Zjn_sc00005.1 maker exon 1608939 1609148 . + . ID=Zjn_sc00005.1.g01690.1.am.mkhc:exon:5
Zjn_sc00005.1 maker exon 1609243 1609358 . + . ID=Zjn_sc00005.1.g01690.1.am.mkhc:exon:6
Zjn_sc00005.1 maker exon 1609747 1610933 . + . ID=Zjn_sc00005.1.g01690.1.am.mkhc:exon:7

Top