Z. japonica Nagirizaki
Zjn_sc00005.1.g01570.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G48030.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 477 1 477 0.0 106.3 80.7 90.6
Subject 507 1 507
Annot | Symbols: mtLPD1 | mitochondrial lipoamide dehydrogenase 1 | chr1:17717432-17719141 REVERSE LENGTH=507
NR ref|XP_004968669.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 477 1 477 0.0 105.9 94.1 96.9
Subject 505 1 505
Annot PREDICTED: dihydrolipoyl dehydrogenase, mitochondrial-like isoform X2 [Setaria italica]
IRGSP Os01t0328700-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 477 1 477 0.0 105.5 93.3 96.2
Subject 503 1 503
Annot
Sbicolor Sobic.003G152900.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 477 1 477 0.0 105.7 93.3 96.9
Subject 504 1 504
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00005.1.g01570.1.sm.mkhc length: 477 aa.
IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
method AccNumber shortName E-value location
Biological Process GO:0045454 cell redox homeostasis    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:3.30.390.30 no description 1.6e-49 346-476
HMMPfam PF02852 Pyr_redox_dim 4.4e-40 358-466
IPR006258 Dihydrolipoamide dehydrogenase
Molecular Function GO:0004148 dihydrolipoyl dehydrogenase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPanther PTHR22912:SF20 DIHYDROLIPOAMIDE 4.1e-200 27-477
HMMTigr TIGR01350 lipoamide_DH: 2.5e-132 85-477
IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site
Molecular Function GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS00076 PYRIDINE_REDOX_1 NA 71-81
IPR013027 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00368 FADPNR 7.5e-39 38-57
147-165
186-204
275-291
304-326
IPR016156 FAD/NAD-linked reductase, dimerisation domain
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
superfamily SSF55424 FAD/NAD-linked 5.7e-43 355-476
IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF07992 Pyr_redox_2 8.9e-38 37-326
no_ID  
FPrintScan PR00411 PNDRDTASEI 7.8e-77 37-59
70-85
186-211
276-290
319-326
354-375
419-434
441-461
Gene3D G3DSA:3.50.50.60 no description 6.1e-53 35-150
151-345
HMMPanther PTHR22912 DISULFIDE 4.1e-200 27-477
Seg seg seg NA 1-32
38-49
superfamily SSF51905 FAD/NAD(P)-binding 1.3e-62 33-333
Pseudomolecule
Chromosome Start End Strand
656238235627639-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00005.1 maker exon 1496397 1496645 . + . ID=Zjn_sc00005.1.g01570.1.sm.mkhc:exon:1
Zjn_sc00005.1 maker exon 1499029 1500213 . + . ID=Zjn_sc00005.1.g01570.1.sm.mkhc:exon:2

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