Z. japonica Nagirizaki
Zjn_sc00005.1.g00750.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G47910.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 892 48 892 0.0 103.3 57.1 73.5
Subject 921 72 921
Annot | Symbols: RBOHD, ATRBOHD | respiratory burst oxidase homologue D | chr5:19397585-19401768 FORWARD LENGTH=921
NR ref|XP_004968726.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 892 16 892 0.0 100.8 90.2 94.4
Subject 899 13 899
Annot PREDICTED: respiratory burst oxidase homolog protein B [Setaria italica]
IRGSP Os01t0360200-03_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 892 16 892 0.0 101.5 85.4 90.8
Subject 905 18 905
Annot
Sbicolor Sobic.003G161500.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 892 16 892 0.0 100.4 89.2 93.7
Subject 896 13 896
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00005.1.g00750.1.sm.mkhc length: 892 aa.
IPR000778 Cytochrome b245, heavy chain
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00466 GP91PHOX 9.5e-18 428-446
521-541
688-701
711-728
IPR002048 EF-hand domain
Molecular Function GO:0005509 calcium ion binding    
HMMPfam PF13405 EF-hand_6 5.5e-05 231-257
HMMSmart SM00054 EF-hand, 0.0082 231-259
ProfileScan PS50222 EF_HAND_2 12.477 227-262
IPR011992 EF-hand domain pair
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 3.8e-10 161-291
IPR013112 FAD-binding 8
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08022 FAD_binding_8 1.7e-30 582-699
IPR013121 Ferric reductase, NAD binding
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08030 NAD_binding_6 2.5e-48 706-874
IPR013130 Ferric reductase transmembrane component-like domain
HMMPfam PF01794 Ferric_reduct 6.9e-16 382-539
IPR013623 NADPH oxidase Respiratory burst
Molecular Function GO:0004601 peroxidase activity    
Molecular Function GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08414 NADPH_Ox 1.5e-37 133-230
IPR017927 Ferredoxin reductase-type FAD-binding domain
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
ProfileScan PS51384 FAD_FR 14.070 574-702
IPR017938 Riboflavin synthase-like beta-barrel
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
superfamily SSF63380 Riboflavin 1.7e-16 578-701
IPR018247 EF-Hand 1, calcium-binding site
PatternScan PS00018 EF_HAND_1 NA 240-252
no_ID  
Coil coil coiled-coil NA 258-279
Gene3D G3DSA:2.40.30.10 no description 6.9e-12 582-655
Gene3D G3DSA:3.40.50.80 no description 1.8e-09 705-887
HMMPanther PTHR11972 NADPH 0 1-892
HMMPanther PTHR11972:SF5 RESPIRATORY 0 1-892
Seg seg seg NA 75-85
305-318
429-444
superfamily SSF47473 EF-hand 2.5e-17 133-291
superfamily SSF52343 Ferredoxin 3.3e-11 702-892
Pseudomolecule
Chromosome Start End Strand
663467456352200-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00005.1 maker exon 771836 771947 . + . ID=Zjn_sc00005.1.g00750.1.sm.mkhc:exon:1
Zjn_sc00005.1 maker exon 772062 772129 . + . ID=Zjn_sc00005.1.g00750.1.sm.mkhc:exon:2
Zjn_sc00005.1 maker exon 772946 773530 . + . ID=Zjn_sc00005.1.g00750.1.sm.mkhc:exon:3
Zjn_sc00005.1 maker exon 773653 773812 . + . ID=Zjn_sc00005.1.g00750.1.sm.mkhc:exon:4
Zjn_sc00005.1 maker exon 774022 774070 . + . ID=Zjn_sc00005.1.g00750.1.sm.mkhc:exon:5
Zjn_sc00005.1 maker exon 774159 774272 . + . ID=Zjn_sc00005.1.g00750.1.sm.mkhc:exon:6
Zjn_sc00005.1 maker exon 774389 774790 . + . ID=Zjn_sc00005.1.g00750.1.sm.mkhc:exon:7
Zjn_sc00005.1 maker exon 774965 775351 . + . ID=Zjn_sc00005.1.g00750.1.sm.mkhc:exon:8
Zjn_sc00005.1 maker exon 775429 775521 . + . ID=Zjn_sc00005.1.g00750.1.sm.mkhc:exon:9
Zjn_sc00005.1 maker exon 775720 775835 . + . ID=Zjn_sc00005.1.g00750.1.sm.mkhc:exon:10
Zjn_sc00005.1 maker exon 775922 776024 . + . ID=Zjn_sc00005.1.g00750.1.sm.mkhc:exon:11
Zjn_sc00005.1 maker exon 776150 776229 . + . ID=Zjn_sc00005.1.g00750.1.sm.mkhc:exon:12
Zjn_sc00005.1 maker exon 776304 776815 . + . ID=Zjn_sc00005.1.g00750.1.sm.mkhc:exon:13
Zjn_sc00005.1 maker exon 776888 777291 . + . ID=Zjn_sc00005.1.g00750.1.sm.mkhc:exon:14

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