Z. japonica Nagirizaki
Zjn_sc00004.1.g13010.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G47128.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 301 1 161 4e-36 153.5 27.2 36.2
Subject 462 1 158
Annot | Symbols: RD21, RD21A | Granulin repeat cysteine protease family protein | chr1:17283139-17285609 REVERSE LENGTH=462
NR ref|XP_004960237.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 301 24 161 1e-60 153.2 38.9 41.2
Subject 461 23 162
Annot PREDICTED: oryzain beta chain-like [Setaria italica]
IRGSP Os04t0670200-01_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 301 19 161 4e-53 154.8 36.2 39.9
Subject 466 15 162
Annot
Sbicolor Sobic.006G260300.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 301 29 161 4e-57 155.1 35.9 38.2
Subject 467 31 166
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00004.1.g13010.1.am.mkhc length: 301 aa.
IPR000118 Granulin
method AccNumber shortName E-value location
HMMPfam PF00396 Granulin 2.9e-11 232-279
HMMSmart SM00277 Granulin 1.9e-26 221-278
IPR013128 Peptidase C1A, papain
Molecular Function GO:0008234 cysteine-type peptidase activity    
HMMPanther PTHR12411 CYSTEINE 1.8e-69 4-294
IPR013201 Proteinase inhibitor I29, cathepsin propeptide
HMMPfam PF08246 Inhibitor_I29 3.2e-14 54-112
HMMSmart SM00848 Cathepsin 1.1e-24 54-112
no_ID  
Gene3D G3DSA:3.90.70.10 no description 0.00019 16-161
163-196
HMMPanther PTHR12411:SF44 CYSTEINE 1.8e-69 4-294
ProfileScan PS51257 PROKAR_LIPOPROTEIN 5.000 1-21
Seg seg seg NA 14-27
201-217
superfamily SSF54001 Cysteine 1.9e-30 44-196
superfamily SSF57277 Granulin 1e-10 218-252
Pseudomolecule
Chromosome Start End Strand
121557000015573156-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00004.1 maker exon 5657354 5657848 . - . ID=Zjn_sc00004.1.g13010.1.am.mkhc:exon:4
Zjn_sc00004.1 maker exon 5658098 5658349 . - . ID=Zjn_sc00004.1.g13010.1.am.mkhc:exon:3
Zjn_sc00004.1 maker exon 5658651 5658754 . - . ID=Zjn_sc00004.1.g13010.1.am.mkhc:exon:2
Zjn_sc00004.1 maker exon 5659944 5660510 . - . ID=Zjn_sc00004.1.g13010.1.am.mkhc:exon:1

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