Z. japonica Nagirizaki
Zjn_sc00004.1.g11920.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G67230.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 473 36 445 2e-62 104 30.4 46.5
Subject 492 39 434
Annot | Symbols: IRX14-L, I14H | Nucleotide-diphospho-sugar transferases superfamily protein | chr5:26822506-26824181 FORWARD LENGTH=492
NR ref|XP_008668660.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 473 1 473 e-174 95.3 75.9 80.3
Subject 451 1 451
Annot PREDICTED: glycosyltransferase isoform X1 [Zea mays] gi|414585110|tpg|DAA35681.1| TPA: glycosyltransferase [Zea mays]
IRGSP Os04t0650366-00_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 473 1 248 2e-81 95.6 40.4 43.1
Subject 452 1 246
Annot
Sbicolor Sobic.006G242100.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 473 1 473 e-170 96 74.4 78.6
Subject 454 1 454
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00004.1.g11920.1.sm.mkhc length: 473 aa.
IPR005027 Glycosyl transferase, family 43
method AccNumber shortName E-value location
Molecular Function GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity    
Cellular Component GO:0016020 membrane    
HMMPanther PTHR10896 GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3.1e-40 123-451
HMMPfam PF03360 Glyco_transf_43 1.8e-30 192-427
no_ID  
Gene3D G3DSA:3.90.550.10 no description 4.5e-48 171-440
HMMPanther PTHR10896:SF1 BETA-1,3-GLUCURONYLTRANSFERASE 3.1e-40 123-451
Seg seg seg NA 89-113
superfamily SSF53448 Nucleotide-diphospho-sugar 1.2e-53 171-447
Pseudomolecule
Chromosome Start End Strand
121510999115113403-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00004.1 maker exon 5197345 5198325 . - . ID=Zjn_sc00004.1.g11920.1.sm.mkhc:exon:2
Zjn_sc00004.1 maker exon 5199445 5200757 . - . ID=Zjn_sc00004.1.g11920.1.sm.mkhc:exon:1

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