Z. japonica Nagirizaki
Zjn_sc00004.1.g11910.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G47128.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 294 14 157 5e-39 157.1 27.6 35.4
Subject 462 9 159
Annot | Symbols: RD21, RD21A | Granulin repeat cysteine protease family protein | chr1:17283139-17285609 REVERSE LENGTH=462
NR ref|NP_001105993.2| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 294 28 157 4e-58 159.2 36.4 39.8
Subject 468 28 157
Annot cysteine protease component of protease-inhibitor complex precursor [Zea mays] gi|414585111|tpg|DAA35682.1| TPA: cysteine proteinase Mir3 [Zea mays]
IRGSP Os04t0650000-02_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 294 28 153 1e-57 53.7 35 37.8
Subject 158 22 147
Annot
Sbicolor Sobic.006G242000.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 294 28 157 1e-63 157.8 37.4 40.8
Subject 464 27 156
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00004.1.g11910.1.sm.mkhc length: 294 aa.
IPR000118 Granulin
method AccNumber shortName E-value location
HMMPfam PF00396 Granulin 3.8e-13 211-258
HMMSmart SM00277 Granulin 3e-20 204-257
IPR000668 Peptidase C1A, papain C-terminal
Biological Process GO:0006508 proteolysis    
Molecular Function GO:0008234 cysteine-type peptidase activity    
HMMPfam PF00112 Peptidase_C1 6.5e-07 135-157
162-210
HMMSmart SM00645 Papain 0.0027 135-245
IPR013128 Peptidase C1A, papain
Molecular Function GO:0008234 cysteine-type peptidase activity    
HMMPanther PTHR12411 CYSTEINE 6.4e-73 1-273
IPR013201 Proteinase inhibitor I29, cathepsin propeptide
HMMPfam PF08246 Inhibitor_I29 9.5e-17 46-106
HMMSmart SM00848 Cathepsin 1.1e-29 46-106
no_ID  
Gene3D G3DSA:3.90.70.10 no description 2.3e-08 16-157
160-209
HMMPanther PTHR12411:SF44 CYSTEINE 6.4e-73 1-273
Seg seg seg NA 10-27
superfamily SSF54001 Cysteine 2.4e-40 36-218
Pseudomolecule
Chromosome Start End Strand
121510445415107392-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00004.1 maker exon 5191808 5192215 . - . ID=Zjn_sc00004.1.g11910.1.sm.mkhc:exon:4
Zjn_sc00004.1 maker exon 5192318 5192470 . - . ID=Zjn_sc00004.1.g11910.1.sm.mkhc:exon:3
Zjn_sc00004.1 maker exon 5193405 5193545 . - . ID=Zjn_sc00004.1.g11910.1.sm.mkhc:exon:2
Zjn_sc00004.1 maker exon 5194264 5194746 . - . ID=Zjn_sc00004.1.g11910.1.sm.mkhc:exon:1

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