Z. japonica Nagirizaki
Zjn_sc00004.1.g11460.1.sm.mk ( /TE )
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G28857.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 101 3 101 5e-20 91.1 52.5 72.3
Subject 92 2 92
Annot | Symbols: | basic helix-loop-helix (bHLH) DNA-binding family protein | chr3:10855781-10856313 REVERSE LENGTH=92
NR ref|XP_002448623.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 101 26 101 2e-33 103 73.3 74.3
Subject 104 29 104
Annot hypothetical protein SORBIDRAFT_06g030340 [Sorghum bicolor] gi|241939806|gb|EES12951.1| hypothetical protein SORBIDRAFT_06g030340 [Sorghum bicolor]
IRGSP Os04t0641700-00_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 101 26 101 2e-35 103 70.3 74.3
Subject 104 29 104
Annot
Sbicolor Sobic.006G236600.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 101 26 101 9e-37 103 73.3 74.3
Subject 104 29 104
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00004.1.g11460.1.sm.mk length: 101 aa.
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
Gene3D G3DSA:4.10.280.10 no description 5.2e-07 27-72
HMMPfam PF00010 HLH 0.00021 27-68
ProfileScan PS50888 BHLH 9.369 13-68
no_ID  
Coil coil coiled-coil NA 65-86
Seg seg seg NA 2-25
75-86
Pseudomolecule
Chromosome Start End Strand
121488213014882582-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00004.1 maker_non_over exon 4969484 4969636 . - . ID=Zjn_sc00004.1.g11460.1.sm.mk:exon:2
Zjn_sc00004.1 maker_non_over exon 4969784 4969936 . - . ID=Zjn_sc00004.1.g11460.1.sm.mk:exon:1

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