Z. japonica Nagirizaki
Zjn_sc00004.1.g10060.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G22200.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 255 132 253 2e-42 197.6 30.6 38.8
Subject 504 380 502
Annot | Symbols: POP2, GABA-T, HER1 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr3:7835286-7838863 FORWARD LENGTH=504
NR gb|KHG00607.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 255 8 253 5e-81 153.7 62.4 74.9
Subject 392 139 389
Annot Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Gossypium arboreum]
IRGSP Os04t0614600-01_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 255 132 254 1e-48 202.4 35.7 41.2
Subject 516 390 515
Annot
Sbicolor Sobic.006G214200.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 255 132 254 4e-53 200.4 38.4 42.4
Subject 511 389 511
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00004.1.g10060.1.sm.mkhc length: 255 aa.
IPR005814 Aminotransferase class-III
method AccNumber shortName E-value location
Molecular Function GO:0008483 transaminase activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPanther PTHR11986 AMINOTRANSFERASE 7e-62 15-246
HMMPfam PF00202 Aminotran_3 6.4e-13 13-75
105-147
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 1.5e-13 13-74
105-138
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 4.7e-18 139-241
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 1e-36 15-243
no_ID  
HMMPanther PTHR11986:SF24 AMINOTRANSFERASE 7e-62 15-246
Pseudomolecule
Chromosome Start End Strand
121429845314304377+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00004.1 maker exon 4385807 4386423 . + . ID=Zjn_sc00004.1.g10060.1.sm.mkhc:exon:1
Zjn_sc00004.1 maker exon 4387976 4388068 . + . ID=Zjn_sc00004.1.g10060.1.sm.mkhc:exon:2
Zjn_sc00004.1 maker exon 4388509 4388582 . + . ID=Zjn_sc00004.1.g10060.1.sm.mkhc:exon:3
Zjn_sc00004.1 maker exon 4388725 4388738 . + . ID=Zjn_sc00004.1.g10060.1.sm.mkhc:exon:4
Zjn_sc00004.1 maker exon 4388893 4388981 . + . ID=Zjn_sc00004.1.g10060.1.sm.mkhc:exon:5
Zjn_sc00004.1 maker exon 4389228 4389302 . + . ID=Zjn_sc00004.1.g10060.1.sm.mkhc:exon:6
Zjn_sc00004.1 maker exon 4389512 4389559 . + . ID=Zjn_sc00004.1.g10060.1.sm.mkhc:exon:7
Zjn_sc00004.1 maker exon 4390269 4390328 . + . ID=Zjn_sc00004.1.g10060.1.sm.mkhc:exon:8
Zjn_sc00004.1 maker exon 4390416 4390494 . + . ID=Zjn_sc00004.1.g10060.1.sm.mkhc:exon:9
Zjn_sc00004.1 maker exon 4390729 4390844 . + . ID=Zjn_sc00004.1.g10060.1.sm.mkhc:exon:10
Zjn_sc00004.1 maker exon 4390946 4391731 . + . ID=Zjn_sc00004.1.g10060.1.sm.mkhc:exon:11

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