Z. japonica Nagirizaki
Zjn_sc00004.1.g09130.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
No_hits |
| NR |
ref|XP_006652759.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
168 |
1 |
161 |
1e-59 |
232.7 |
71.4 |
82.1 |
| Subject |
391 |
228 |
391 |
|
| Annot |
PREDICTED: LOW QUALITY PROTEIN: growth-regulating factor 3-like [Oryza brachyantha] |
| IRGSP |
Os04t0600900-01_chr04_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
168 |
1 |
156 |
1e-58 |
177.4 |
67.3 |
78 |
| Subject |
298 |
137 |
295 |
|
| Annot |
|
| Sbicolor |
Sobic.006G203400.1.p|Chr06|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
168 |
1 |
161 |
1e-57 |
225 |
75 |
83.9 |
| Subject |
378 |
219 |
378 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00004.1.g09130.1.sm.mkhc |
length: 168 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR31602 |
FAMILY |
1.5e-12 |
97-160 |
| Seg |
seg |
seg |
NA |
3-14 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 12 | 13869296 | 13871580 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00004.1 |
maker |
exon |
3956650 |
3956674 |
. |
- |
. |
ID=Zjn_sc00004.1.g09130.1.sm.mkhc:exon:3 |
| Zjn_sc00004.1 |
maker |
exon |
3957062 |
3957487 |
. |
- |
. |
ID=Zjn_sc00004.1.g09130.1.sm.mkhc:exon:2 |
| Zjn_sc00004.1 |
maker |
exon |
3958729 |
3958934 |
. |
- |
. |
ID=Zjn_sc00004.1.g09130.1.sm.mkhc:exon:1 |