Z. japonica Nagirizaki
Zjn_sc00004.1.g08920.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G32060.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 384 1 384 e-176 102.9 77.1 85.9
Subject 395 1 391
Annot | Symbols: PRK | phosphoribulokinase | chr1:11532668-11534406 FORWARD LENGTH=395
NR ref|XP_002448449.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 384 1 377 0.0 100.8 81.3 88
Subject 387 1 385
Annot hypothetical protein SORBIDRAFT_06g027270 [Sorghum bicolor] gi|241939632|gb|EES12777.1| hypothetical protein SORBIDRAFT_06g027270 [Sorghum bicolor]
IRGSP Os02t0698000-03_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 384 1 383 e-180 104.9 80.2 89.1
Subject 403 1 402
Annot
Sbicolor Sobic.006G200800.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 384 1 377 0.0 100.8 81.3 88
Subject 387 1 385
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00004.1.g08920.1.sm.mk length: 384 aa.
IPR006082 Phosphoribulokinase
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0008974 phosphoribulokinase activity    
FPrintScan PR00478 PHRIBLKINASE 2e-35 50-67
159-177
194-211
212-235
PatternScan PS00567 PHOSPHORIBULOKINASE NA 194-207
IPR006083 Phosphoribulokinase/uridine kinase
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016301 kinase activity    
HMMPfam PF00485 PRK 2.7e-76 45-243
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 5.6e-36 41-316
no_ID  
Gene3D G3DSA:3.40.50.300 no description 3.2e-93 41-316
HMMPanther PTHR10285 URIDINE 8.7e-207 41-373
HMMPanther PTHR10285:SF29 PHOSPHORIBULOKINASE 8.7e-207 41-373
Seg seg seg NA 375-384
Pseudomolecule
Chromosome Start End Strand
121378028813781871-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00004.1 maker_non_over exon 3867642 3867878 . - . ID=Zjn_sc00004.1.g08920.1.sm.mk:exon:5
Zjn_sc00004.1 maker_non_over exon 3867997 3868241 . - . ID=Zjn_sc00004.1.g08920.1.sm.mk:exon:4
Zjn_sc00004.1 maker_non_over exon 3868379 3868463 . - . ID=Zjn_sc00004.1.g08920.1.sm.mk:exon:3
Zjn_sc00004.1 maker_non_over exon 3868531 3868615 . - . ID=Zjn_sc00004.1.g08920.1.sm.mk:exon:2
Zjn_sc00004.1 maker_non_over exon 3868723 3869225 . - . ID=Zjn_sc00004.1.g08920.1.sm.mk:exon:1

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