Z. japonica Nagirizaki
Zjn_sc00004.1.g07800.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G12480.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 568 33 564 0.0 97.9 61.3 73.4
Subject 556 45 553
Annot | Symbols: OZS1, SLAC1, RCD3, CDI3 | C4-dicarboxylate transporter/malic acid transport protein | chr1:4257427-4259249 REVERSE LENGTH=556
NR ref|XP_008671135.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 568 1 568 0.0 222.4 88.7 94.2
Subject 1263 690 1263
Annot PREDICTED: uncharacterized protein LOC103648441 [Zea mays]
IRGSP Os04t0574700-01_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 568 13 568 0.0 101.8 85.4 91.2
Subject 578 22 578
Annot
Sbicolor Sobic.006G186500.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 568 1 568 0.0 107.6 89.8 95.1
Subject 611 38 611
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00004.1.g07800.1.sm.mk length: 568 aa.
IPR004695 Voltage-dependent anion channel
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF03595 SLAC1 2.8e-50 190-495
no_ID  
HMMPanther PTHR31269 FAMILY 5.5e-238 13-568
HMMPanther PTHR31269:SF0 SUBFAMILY 5.5e-238 13-568
Seg seg seg NA 11-25
58-71
229-241
474-496
Pseudomolecule
Chromosome Start End Strand
121330316013305053+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00004.1 maker_non_over exon 3390514 3391029 . + . ID=Zjn_sc00004.1.g07800.1.sm.mk:exon:1
Zjn_sc00004.1 maker_non_over exon 3391137 3391942 . + . ID=Zjn_sc00004.1.g07800.1.sm.mk:exon:2
Zjn_sc00004.1 maker_non_over exon 3392023 3392407 . + . ID=Zjn_sc00004.1.g07800.1.sm.mk:exon:3

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