| TAIR10 | AT5G52020.1 | Length | Start | End | E-value | Length(%) | Iden(%) | Posi(%) | |
|---|---|---|---|---|---|---|---|---|---|
| Query | 247 | 58 | 245 | 6e-38 | 93.9 | 39.7 | 46.6 | ||
| Subject | 232 | 59 | 232 | ||||||
| Annot | | Symbols: | Integrase-type DNA-binding superfamily protein | chr5:21124192-21124890 REVERSE LENGTH=232 | ||||||||
| NR | ref|XP_002446959.1| | Length | Start | End | E-value | Length(%) | Iden(%) | Posi(%) | |
| Query | 247 | 50 | 247 | 2e-74 | 87.4 | 68 | 70.4 | ||
| Subject | 216 | 5 | 216 | ||||||
| Annot | hypothetical protein SORBIDRAFT_06g025890 [Sorghum bicolor] gi|241938142|gb|EES11287.1| hypothetical protein SORBIDRAFT_06g025890 [Sorghum bicolor] | ||||||||
| IRGSP | Os04t0572200-00_chr04_irgsp1_locus | Length | Start | End | E-value | Length(%) | Iden(%) | Posi(%) | |
| Query | 247 | 51 | 247 | 2e-65 | 83.4 | 65.2 | 69.2 | ||
| Subject | 206 | 5 | 206 | ||||||
| Annot | |||||||||
| Sbicolor | Sobic.006G184700.1.p|Chr06|gene | Length | Start | End | E-value | Length(%) | Iden(%) | Posi(%) | |
| Query | 247 | 50 | 247 | 3e-77 | 87.4 | 68 | 70.4 | ||
| Subject | 216 | 5 | 216 | ||||||
| Annot | |||||||||
| Zjn_sc00004.1.g07680.1.am.mk | length: 247 aa. | |||
| IPR001471 | AP2/ERF domain | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003700 | sequence-specific DNA binding transcription factor activity | ||
| Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
| Gene3D | G3DSA:3.30.730.10 | no description | 1e-26 | 64-120 |
| HMMPfam | PF00847 | AP2 | 6.3e-14 | 63-111 |
| HMMSmart | SM00380 | DNA-binding | 1.1e-28 | 63-125 |
| ProfileScan | PS51032 | AP2_ERF | 20.323 | 63-119 |
| IPR016177 | DNA-binding domain | |||
| Molecular Function | GO:0003677 | DNA binding | ||
| superfamily | SSF54171 | DNA-binding | 7.5e-20 | 62-122 |
| no_ID | ||||
| HMMPanther | PTHR31839 | FAMILY | 1.8e-40 | 61-244 |
| HMMPanther | PTHR31839:SF0 | SUBFAMILY | 1.8e-40 | 61-244 |
| Seg | seg | seg | NA | 95-108 119-146 149-175 219-235 |
| Chromosome | Start | End | Strand |
|---|---|---|---|
| 12 | 13239724 | 13240544 | + |
| scaffold | source | type | start | end | score | strand | phase | attributes |
|---|---|---|---|---|---|---|---|---|
| Zjn_sc00004.1 | maker_non_over | exon | 3327078 | 3327216 | . | + | . | ID=Zjn_sc00004.1.g07680.1.am.mk:exon:1 |
| Zjn_sc00004.1 | maker_non_over | exon | 3327294 | 3327898 | . | + | . | ID=Zjn_sc00004.1.g07680.1.am.mk:exon:2 |