Z. japonica Nagirizaki
Zjn_sc00004.1.g07090.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G00430.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 288 1 288 e-146 99.7 85.8 93.8
Subject 287 1 287
Annot | Symbols: TMP-C, PIP1;4, PIP1E | plasma membrane intrinsic protein 1;4 | chr4:186143-187531 REVERSE LENGTH=287
NR ref|XP_004976483.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 288 1 288 e-157 100 93.4 97.6
Subject 288 1 288
Annot PREDICTED: aquaporin PIP1-1-like [Setaria italica]
IRGSP Os02t0666200-02_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 288 1 288 e-157 100.3 92.4 97.2
Subject 289 1 289
Annot
Sbicolor Sobic.006G176700.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 288 1 288 e-158 100 93.4 96.5
Subject 288 1 288
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00004.1.g07090.1.sm.mkhc length: 288 aa.
IPR000425 Major intrinsic protein
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00783 MINTRINSICP 9.3e-71 54-73
96-120
133-152
182-200
218-240
258-278
HMMPanther PTHR19139 AQUAPORIN 1.7e-227 1-287
HMMPfam PF00230 MIP 1.1e-84 46-275
HMMTigr TIGR00861 MIP: 1.1e-65 58-274
IPR022357 Major intrinsic protein, conserved site
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
PatternScan PS00221 MIP NA 114-122
IPR023271 Aquaporin-like
Gene3D G3DSA:1.20.1080.10 no description 1.4e-88 25-280
superfamily SSF81338 Aquaporin-like 9.6e-61 43-279
no_ID  
HMMPanther PTHR19139:SF56 SUBFAMILY 1.7e-227 1-287
Pseudomolecule
Chromosome Start End Strand
121292484512926843+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00004.1 maker exon 3012199 3012753 . + . ID=Zjn_sc00004.1.g07090.1.sm.mkhc:exon:1
Zjn_sc00004.1 maker exon 3012869 3013164 . + . ID=Zjn_sc00004.1.g07090.1.sm.mkhc:exon:2
Zjn_sc00004.1 maker exon 3013273 3013413 . + . ID=Zjn_sc00004.1.g07090.1.sm.mkhc:exon:3
Zjn_sc00004.1 maker exon 3013871 3014003 . + . ID=Zjn_sc00004.1.g07090.1.sm.mkhc:exon:4
Zjn_sc00004.1 maker exon 3014024 3014197 . + . ID=Zjn_sc00004.1.g07090.1.sm.mkhc:exon:5

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