Zoysia Genome Database

Z. japonica Nagirizaki

Zjn_sc00004.1.g06580.1.am.mk

Sequence

Transcript sequence

Predicted nucleotide sequence (cds)
Predicted translated sequence (pep)

Genome sequence (Zjn_sc00004.1)

BLAST

TAIR10	AT3G57560.1		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	337	59	337	e-114	103	60.5	73.3
		Subject	347	69	347
		Annot	\| Symbols: NAGK \| N-acetyl-l-glutamate kinase \| chr3:21311164-21312207 REVERSE LENGTH=347
NR	dbj\|BAJ94786.1\|		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	337	1	337	e-161	100	88.7	92.9
		Subject	337	1	337
		Annot	predicted protein [Hordeum vulgare subsp. vulgare]
IRGSP	Os04t0550500-05_chr04_irgsp1_locus		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	337	1	337	e-158	101.8	88.4	93.2
		Subject	343	1	343
		Annot
Sbicolor	Sobic.006G170200.1.p\|Chr06\|gene		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	337	1	337	e-153	103.6	88.1	92.9
		Subject	349	1	349
		Annot

InterProScan

A list of protein families, domains and functional sites (searches in InterPro)

IPR001048	Aspartate/glutamate/uridylate kinase
Zjn_sc00004.1.g06580.1.am.mk				length: 337 aa.
method	AccNumber	shortName	E-value	location
Biological Process	GO:0008652	cellular amino acid biosynthetic process
Gene3D	G3DSA:3.40.1160.10	no description	1.2e-97	74-336
HMMPfam	PF00696	AA_kinase	4.1e-40	76-313
superfamily	SSF53633	Carbamate	2.6e-84	50-337
IPR001057	Glutamate/acetylglutamate kinase
Molecular Function	GO:0004349	glutamate 5-kinase activity
Biological Process	GO:0006561	proline biosynthetic process
FPrintScan	PR00474	GLU5KINASE	1.4e-07	107-121 234-261 287-307
IPR004662	Acetylglutamate kinase
Molecular Function	GO:0003991	acetylglutamate kinase activity
Cellular Component	GO:0005737	cytoplasm
Biological Process	GO:0006526	arginine biosynthetic process
HMMPIR	PIRSF000728	N-acetylglutamate	3e-137	53-337
HMMTigr	TIGR00761	argB:	6.5e-79	77-312
no_ID
HMMPanther	PTHR31567	FAMILY	1.5e-135	43-336
Seg	seg	seg	NA	14-28 47-55 235-249

Pseudomolecule

Chromosome	Start	End	Strand
12	12725855	12726868	+

Coding region

scaffold	source	type	start	end	score	strand	phase	attributes
Zjn_sc00004.1	maker_non_over	exon	2813209	2814222	.	+	.	ID=Zjn_sc00004.1.g06580.1.am.mk:exon:1