Z. japonica Nagirizaki
Zjn_sc00004.1.g02310.1.am.mkhc
Sequence
-
BLAST
| TAIR10 |
AT4G32120.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
286 |
33 |
286 |
4e-72 |
120.6 |
54.2 |
64.3 |
| Subject |
345 |
29 |
345 |
|
| Annot |
| Symbols: | Galactosyltransferase family protein | chr4:15517230-15519687 REVERSE LENGTH=345 |
| NR |
ref|XP_004964708.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
286 |
1 |
286 |
e-108 |
124.5 |
79.4 |
85 |
| Subject |
356 |
1 |
356 |
|
| Annot |
PREDICTED: probable beta-1,3-galactosyltransferase 10 [Setaria italica] |
| IRGSP |
Os06t0177300-01_chr06_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
286 |
1 |
286 |
e-107 |
123.8 |
78.7 |
83.9 |
| Subject |
354 |
1 |
354 |
|
| Annot |
|
| Sbicolor |
Sobic.010G059700.1.p|Chr10|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
286 |
1 |
286 |
e-109 |
123.4 |
77.6 |
85.3 |
| Subject |
353 |
1 |
353 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00004.1.g02310.1.am.mkhc |
length: 286 aa. |
| IPR002659 |
Glycosyl transferase, family 31 |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006486 |
protein glycosylation |
|
|
| Molecular Function |
GO:0008378 |
galactosyltransferase activity |
|
|
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPanther |
PTHR11214 |
BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASET[115-280] |
1.1e-66 |
|
| HMMPfam |
PF01762 |
Galactosyl_T |
0.00011 |
187-239 |
| IPR025298 |
Domain of unknown function DUF4094 |
| HMMPfam |
PF13334 |
DUF4094 |
2e-06 |
32-128 |
| no_ID |
|
| HMMPanther |
PTHR11214:SF6 |
BETA |
1.1e-66 |
115-280 |
| Seg |
seg |
seg |
NA |
19-29 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 19 | 1479560 | 1483998 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00004.1 |
maker |
exon |
1058732 |
1059285 |
. |
- |
. |
ID=Zjn_sc00004.1.g02310.1.am.mkhc:exon:9 |
| Zjn_sc00004.1 |
maker |
exon |
1059367 |
1059479 |
. |
- |
. |
ID=Zjn_sc00004.1.g02310.1.am.mkhc:exon:8 |
| Zjn_sc00004.1 |
maker |
exon |
1061319 |
1061364 |
. |
- |
. |
ID=Zjn_sc00004.1.g02310.1.am.mkhc:exon:7 |
| Zjn_sc00004.1 |
maker |
exon |
1061449 |
1061572 |
. |
- |
. |
ID=Zjn_sc00004.1.g02310.1.am.mkhc:exon:6 |
| Zjn_sc00004.1 |
maker |
exon |
1062054 |
1062088 |
. |
- |
. |
ID=Zjn_sc00004.1.g02310.1.am.mkhc:exon:5 |
| Zjn_sc00004.1 |
maker |
exon |
1062364 |
1062557 |
. |
- |
. |
ID=Zjn_sc00004.1.g02310.1.am.mkhc:exon:4 |
| Zjn_sc00004.1 |
maker |
exon |
1062646 |
1062695 |
. |
- |
. |
ID=Zjn_sc00004.1.g02310.1.am.mkhc:exon:3 |
| Zjn_sc00004.1 |
maker |
exon |
1062790 |
1062853 |
. |
- |
. |
ID=Zjn_sc00004.1.g02310.1.am.mkhc:exon:2 |
| Zjn_sc00004.1 |
maker |
exon |
1062888 |
1063170 |
. |
- |
. |
ID=Zjn_sc00004.1.g02310.1.am.mkhc:exon:1 |