Z. japonica Nagirizaki
Zjn_sc00004.1.g01340.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G43190.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 783 18 783 0.0 103.2 75.1 85.6
Subject 808 40 807
Annot | Symbols: SUS4, ATSUS4 | sucrose synthase 4 | chr3:15179204-15182577 REVERSE LENGTH=808
NR ref|XP_006655877.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 783 14 783 0.0 103.2 92.3 96.3
Subject 808 33 802
Annot PREDICTED: sucrose synthase 2-like [Oryza brachyantha]
IRGSP Os06t0194900-03_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 783 14 783 0.0 103.2 92 95.8
Subject 808 33 802
Annot
Sbicolor Sobic.010G072300.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 783 14 783 0.0 102.4 94 96.6
Subject 802 33 802
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00004.1.g01340.1.sm.mkhc length: 783 aa.
IPR000368 Sucrose synthase
method AccNumber shortName E-value location
Biological Process GO:0005985 sucrose metabolic process    
HMMPfam PF00862 Sucrose_synth 0 14-532
IPR001296 Glycosyl transferase, family 1
Biological Process GO:0009058 biosynthetic process    
HMMPfam PF00534 Glycos_transf_1 8.4e-34 536-717
IPR012820 Sucrose synthase, plant/cyanobacteria
Biological Process GO:0005985 sucrose metabolic process    
Molecular Function GO:0016157 sucrose synthase activity    
HMMPanther PTHR12526:SF27 SUCROSE 0 110-775
HMMTigr TIGR02470 sucr_synth: 0 13-780
no_ID  
Gene3D G3DSA:3.40.50.2000 no description 6.3e-17 539-723
HMMPanther PTHR12526 GLYCOSYLTRANSFERASE 0 110-775
Seg seg seg NA 80-94
226-236
superfamily SSF53756 UDP-Glycosyltransferase/glycogen 2.7e-49 265-741
Pseudomolecule
Chromosome Start End Strand
1918715171879211-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00004.1 maker exon 663519 663556 . + . ID=Zjn_sc00004.1.g01340.1.sm.mkhc:exon:1
Zjn_sc00004.1 maker exon 665719 665839 . + . ID=Zjn_sc00004.1.g01340.1.sm.mkhc:exon:2
Zjn_sc00004.1 maker exon 665922 666073 . + . ID=Zjn_sc00004.1.g01340.1.sm.mkhc:exon:3
Zjn_sc00004.1 maker exon 666179 666371 . + . ID=Zjn_sc00004.1.g01340.1.sm.mkhc:exon:4
Zjn_sc00004.1 maker exon 666503 666621 . + . ID=Zjn_sc00004.1.g01340.1.sm.mkhc:exon:5
Zjn_sc00004.1 maker exon 666706 666922 . + . ID=Zjn_sc00004.1.g01340.1.sm.mkhc:exon:6
Zjn_sc00004.1 maker exon 667010 667105 . + . ID=Zjn_sc00004.1.g01340.1.sm.mkhc:exon:7
Zjn_sc00004.1 maker exon 667193 667366 . + . ID=Zjn_sc00004.1.g01340.1.sm.mkhc:exon:8
Zjn_sc00004.1 maker exon 667446 667562 . + . ID=Zjn_sc00004.1.g01340.1.sm.mkhc:exon:9
Zjn_sc00004.1 maker exon 667639 667805 . + . ID=Zjn_sc00004.1.g01340.1.sm.mkhc:exon:10
Zjn_sc00004.1 maker exon 667898 668122 . + . ID=Zjn_sc00004.1.g01340.1.sm.mkhc:exon:11
Zjn_sc00004.1 maker exon 668285 668603 . + . ID=Zjn_sc00004.1.g01340.1.sm.mkhc:exon:12
Zjn_sc00004.1 maker exon 668731 668975 . + . ID=Zjn_sc00004.1.g01340.1.sm.mkhc:exon:13
Zjn_sc00004.1 maker exon 669247 669385 . + . ID=Zjn_sc00004.1.g01340.1.sm.mkhc:exon:14
Zjn_sc00004.1 maker exon 669489 671213 . + . ID=Zjn_sc00004.1.g01340.1.sm.mkhc:exon:15

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