Z. japonica Nagirizaki
Zjn_sc00003.1.g10960.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G39660.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 476 5 476 0.0 100 74.8 85.7
Subject 476 7 476
Annot | Symbols: AGT2 | alanine:glyoxylate aminotransferase 2 | chr4:18406797-18409262 FORWARD LENGTH=476
NR ref|XP_004985531.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 476 1 476 0.0 99.8 95 96.6
Subject 475 1 475
Annot PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial [Setaria italica]
IRGSP Os03t0171900-02_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 476 5 476 0.0 102.1 89.1 92
Subject 486 9 486
Annot
Sbicolor Sobic.001G488200.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 476 1 476 0.0 100.6 95.2 97.3
Subject 479 1 479
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00003.1.g10960.1.sm.mkhc length: 476 aa.
IPR005814 Aminotransferase class-III
method AccNumber shortName E-value location
Molecular Function GO:0008483 transaminase activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPanther PTHR11986 AMINOTRANSFERASE 6.5e-256 1-474
HMMPfam PF00202 Aminotran_3 1.7e-77 83-412
PatternScan PS00600 AA_TRANSFER_CLASS_3 NA 289-327
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 4.2e-72 116-372
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 5.9e-35 373-473
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 3.5e-115 56-476
no_ID  
HMMPanther PTHR11986:SF23 ALANINE-GLYOXYLATE 6.5e-256 1-474
Seg seg seg NA 27-52
416-427
Pseudomolecule
Chromosome Start End Strand
21613152216134624-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00003.1 maker exon 4974759 4975008 . - . ID=Zjn_sc00003.1.g10960.1.sm.mkhc:exon:9
Zjn_sc00003.1 maker exon 4975090 4975176 . - . ID=Zjn_sc00003.1.g10960.1.sm.mkhc:exon:8
Zjn_sc00003.1 maker exon 4975384 4975491 . - . ID=Zjn_sc00003.1.g10960.1.sm.mkhc:exon:7
Zjn_sc00003.1 maker exon 4975675 4975900 . - . ID=Zjn_sc00003.1.g10960.1.sm.mkhc:exon:6
Zjn_sc00003.1 maker exon 4975996 4976175 . - . ID=Zjn_sc00003.1.g10960.1.sm.mkhc:exon:5
Zjn_sc00003.1 maker exon 4976284 4976427 . - . ID=Zjn_sc00003.1.g10960.1.sm.mkhc:exon:4
Zjn_sc00003.1 maker exon 4976644 4976814 . - . ID=Zjn_sc00003.1.g10960.1.sm.mkhc:exon:3
Zjn_sc00003.1 maker exon 4976909 4977139 . - . ID=Zjn_sc00003.1.g10960.1.sm.mkhc:exon:2
Zjn_sc00003.1 maker exon 4977622 4977861 . - . ID=Zjn_sc00003.1.g10960.1.sm.mkhc:exon:1

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